Protein

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Genbank accession
GENB_075d760a5890 [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MADTIDLDGEKFVSPSFVTSATSLDDIYTAWVADFQGSTTAYNPSWPSTDDSATLLPIPPLWTGGADRLVVSTECGVEIVPYQFTSASTHYSQAIAGVSRYYSINCGLRLAIIFHPTGVDSGITSFSGNYNADLALFRGTHNRSSENVQFVARVVPGRQIDVAIKNTAQTAGLPIKLVVLNGTTVVSSTDLTTIVQGGVTLVTCSIYGGTVSGTVVDQAGQPATRIVHVHERETGSVIGRGRSDSSGLFEIPVIAKVGTTMYVVGLDDENSPLINAVIADRIVLE
Physico‐chemical
properties
protein length:285 AA
molecular weight: 30120,44440 Da
isoelectric point:4,76876
aromaticity:0,07368
hydropathy:0,16070

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_075d760a5890
1 285
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,7600
Central domain 21 219 200 0,4220
C-terminal 220 285 65 0,4371
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-285

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JBD90
[NCBI] 		1542118 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
e67dd24ed8b4a88a75f60d0376b920476c82ce8c345bae5ed527c78d222f600d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4737
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50