Protein

View in Explore
Genbank accession
YP_009320466.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MTFSFAPNDEPLYVSEGDYVQFKFKAPSSWDTTQTVTLQIGDLLQYWLITTIKEDFTPDPYPMQGFEDADVDTLYTFADGSRPGESIVVVSGLTPTTQAAVGISSNVPIPGGSPVTDYVAMRIDYDGDGSWDTGWIDNTASSLTVENGARIQVRGRTSTFYTQIMRIVLEIGTATEVWEVQNEAVPGNFAIPFPNFTDLDPVEPDTMIYSEVLAVQGLNEDAPISVSGTGEYALSVSGNTSTNVNGFDVLLGAAWSTSGIVSNGDYLQLRIPSSTANLTPVFTDLSIADTANGSTWTVTTGVADDDTPGNFSFQDKTGQLTNTLIGSDQQPSAGITGLTAGLSVPVEVVSTDSSLVRVRVNSGSIGVFPTSVQNGDKLTIYLQSNTSFNTPNTLQIKVGERTISTWTVITGSGPDSDAIFTPPIDLTNQVPNTYVTSSQVTISGINIPITINATNGSLISIDSDIPVAGPRTFDPNANTSFAITSLVPTNLNTSQPTVVTVGTGSLNNPFTWTVTSYASAPLPPDNLGVWYSKKVEKFDGYPIGTVLPILKENSVVGYGDLDGDLNSRYPGFIKCEGQSLSTTQYFMLFDVIEYTYGGSGSSFNVPDYRNRRLCGTGQVDASRGNSTSLPIDSGGSILSVGAEGGYWYFDKVDVLGSQPLEQIQGTGTSGVDSQFFTLGTVRITGLETVTDDIIFSITGQVSGIIGPLEDVIVNVPLHDHAYVAALPDSDGGDPLIKWGPPAGRSMFGGQTGTSTYRNQVGSSDDIAGKWADFIGGLGIFENEMKLYYGNGFNLKNWAAENLPTNWEVNVDVPSGAIGQSDFGSENDDATATVDFMTWWISPVSGLSGASLQSTGANEPNPAAAVVDTETTRFTIEQYIPTSGFTNAHAHFLTEDIVQNAQVDFSSGNSGGAGTITGGLGNGVTQLNLVFTQADIFMDMTDATFNWNSSFSKPTPSVTMTPQIQVPILNPFHKTKYIIKAY
Physico‐chemical
properties
protein length:981 AA
molecular weight: 104409,13600 Da
isoelectric point:4,06390
aromaticity:0,09582
hydropathy:-0,11417

Domains

Domains [InterPro]
DC_0346
STR
1–960
DC_0346
IPR037053
ATT
533–609
IPR037053
SSF88874
STR
569–621
SSF88874
IPR011083
ATT
570–611
IPR011083
YP_009320466.1
1 981
Architecture
STR
ATT
STR
STR 1-532 | ATT 533-611 | STR 612-960 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009320466.1
1 981
Domain Start End Length (AA) Confidence
N-terminal 1 609 609 0,8772
Central domain 610 850 242 0,6255
C-terminal 851 981 130 0,4705
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-609
Central
610-850
C-terminal
851-981

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM4
[NCBI] 		1883367 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus cam4
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009320466.1 [NCBI]
Genbank nucleotide accession
NC_031900.1 [NCBI]
CDS location
range 35976 -> 38921
strand +
CDS
ATGACATTTTCATTTGCACCAAATGATGAACCACTTTACGTGTCCGAAGGCGATTACGTTCAGTTTAAATTTAAGGCACCTTCTTCTTGGGATACAACCCAAACAGTCACTCTTCAAATTGGTGACTTACTTCAATATTGGTTAATTACTACGATCAAAGAGGATTTTACTCCTGATCCATATCCCATGCAGGGATTTGAAGATGCTGACGTTGATACTTTGTATACATTTGCTGATGGTAGTAGACCTGGAGAATCAATTGTTGTTGTTAGTGGATTAACACCAACTACACAGGCAGCTGTGGGCATTTCGTCTAATGTTCCTATACCTGGAGGATCTCCTGTTACTGATTATGTTGCGATGCGTATTGATTACGATGGTGATGGAAGTTGGGATACTGGTTGGATTGATAATACTGCTTCTAGTTTGACAGTTGAAAATGGTGCAAGGATACAGGTAAGGGGAAGAACTTCTACTTTTTATACTCAAATTATGAGGATTGTTCTTGAAATTGGAACAGCAACTGAAGTATGGGAAGTTCAAAATGAAGCTGTCCCAGGTAATTTTGCTATACCATTTCCAAATTTTACTGATCTAGATCCGGTAGAACCAGACACAATGATCTATAGTGAGGTTTTGGCGGTACAAGGGTTAAATGAAGATGCTCCTATTAGTGTTAGTGGCACAGGTGAATATGCTTTATCTGTATCTGGTAATACTAGCACTAATGTTAATGGGTTTGATGTATTACTTGGTGCTGCTTGGTCCACTAGTGGAATTGTAAGTAATGGAGATTATTTACAATTACGAATTCCAAGTTCTACTGCTAATTTAACACCTGTATTTACAGATTTGTCAATTGCTGATACTGCAAACGGATCAACCTGGACAGTTACCACTGGTGTTGCTGATGATGATACACCAGGCAATTTTTCATTCCAAGATAAAACGGGTCAATTAACTAACACATTGATTGGATCAGATCAGCAACCATCTGCTGGTATTACTGGATTGACAGCTGGTTTATCTGTTCCTGTTGAGGTAGTTTCTACGGATTCTAGTTTAGTTCGTGTGAGAGTTAATAGTGGATCTATTGGAGTATTTCCAACATCTGTGCAAAATGGTGATAAGTTAACAATTTATTTACAATCAAATACTTCATTTAATACTCCTAACACTTTACAAATTAAGGTGGGAGAACGTACTATATCTACATGGACAGTTATAACTGGTAGTGGACCAGATAGTGATGCAATATTTACTCCCCCGATTGATTTGACCAATCAAGTTCCAAACACATATGTGACTAGTTCTCAGGTTACAATAAGCGGTATTAATATACCGATTACTATCAATGCTACGAATGGATCTTTAATTTCTATTGATTCTGATATTCCTGTTGCTGGTCCTAGAACTTTTGATCCTAATGCAAATACATCATTTGCTATAACATCATTAGTACCAACAAACCTTAATACGTCACAACCTACCGTAGTTACAGTAGGAACAGGATCTTTAAACAATCCTTTTACTTGGACAGTAACAAGTTATGCCTCAGCACCTCTACCACCAGATAACCTAGGTGTTTGGTATAGTAAGAAAGTAGAGAAATTTGATGGTTATCCTATTGGGACTGTGTTACCTATTCTTAAAGAAAATTCAGTAGTTGGATATGGAGATCTGGACGGAGATTTAAACTCTAGATATCCAGGATTTATTAAATGTGAAGGTCAATCCTTAAGTACCACTCAATATTTTATGTTATTTGATGTAATTGAATACACTTATGGTGGGTCTGGGTCTAGTTTTAATGTTCCTGACTATAGAAATAGAAGATTGTGTGGAACTGGTCAAGTTGATGCTAGTAGAGGTAATTCTACTTCACTACCAATTGATAGTGGTGGATCTATTCTTAGCGTTGGTGCTGAAGGTGGATATTGGTATTTCGATAAAGTAGATGTTTTAGGTTCGCAACCACTAGAACAAATTCAGGGAACGGGAACCAGTGGAGTAGATAGTCAATTTTTTACTTTGGGCACAGTGAGAATAACTGGTCTTGAAACAGTTACTGATGATATTATATTTTCTATTACTGGTCAAGTTAGTGGTATAATTGGTCCATTGGAAGATGTTATAGTAAATGTTCCTTTACATGATCATGCATATGTTGCCGCTCTTCCTGATAGTGATGGTGGAGATCCATTAATTAAATGGGGTCCTCCTGCTGGTAGGTCTATGTTTGGTGGTCAAACTGGAACAAGTACTTATAGAAATCAAGTTGGTAGTTCTGATGATATTGCTGGTAAATGGGCAGATTTTATTGGTGGTCTTGGAATTTTTGAAAATGAGATGAAATTGTATTATGGCAATGGTTTTAATTTGAAAAATTGGGCAGCTGAAAATTTGCCAACTAATTGGGAAGTTAATGTGGATGTTCCAAGTGGAGCCATTGGTCAATCTGATTTTGGATCAGAGAATGATGATGCTACAGCAACAGTTGATTTTATGACCTGGTGGATATCTCCTGTTAGTGGTTTATCAGGGGCATCTTTACAATCTACTGGTGCCAATGAACCAAACCCAGCAGCTGCTGTTGTTGATACTGAAACAACTAGATTTACAATTGAGCAATATATTCCCACTAGTGGATTTACAAATGCACATGCTCACTTTCTCACAGAAGATATTGTTCAGAATGCTCAAGTTGATTTTAGTTCCGGTAATAGTGGTGGTGCTGGTACTATTACAGGTGGATTGGGAAATGGCGTGACTCAACTTAACCTCGTATTTACTCAAGCAGATATTTTTATGGATATGACAGATGCGACGTTCAACTGGAATAGTAGTTTTTCTAAACCAACTCCTAGTGTTACAATGACACCACAGATTCAAGTGCCAATTCTCAATCCATTCCATAAGACTAAATATATCATCAAAGCATATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2de1acc37256e2cca51aea9fe7015070d64dcbd603f5bbc742d363d8934b1a79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5428
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50