Protein

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Genbank accession
AUR96764.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTDRYFNSVDFAGSDGGAGFTLGPAQNVFTGSDRAAAEAARNTFLADNPSWLATYNADTSLNIRLEFTEGTTAVAVYQVRNDAGNGWLDNESFEALRGAPGEDGSGTDFGGVSSNHIPAIDEDGRPYDSGIDVTETSLVTPKDLQVGLGTILLGQSASPVHSFSSAGENIVFGNRVSNRPFTPGGWSDGSAGEDWASYHRKGGTYHAADVIQAIDSDQLTNPSFPTTLGTNRRDYRIGIKAVSAQSKCYAVIKQSGIAIFESKRQSLTVGDNSFDLSVVNGSQGFFDLIGSVQYTVEFLSEDGDIVLLGDGVTGTPYLELDWQEWEDIRQPDQDDIDNLLSPTWGAVDSSDPNIIYGGFKQTGRIRKRELSAGDDTWFQSSINLPVPSEAAWSDWQSRESLIYGDL
Physico‐chemical
properties
protein length:406 AA
molecular weight: 43728,95630 Da
isoelectric point:4,24470
aromaticity:0,10099
hydropathy:-0,40123

Domains

Domains [InterPro]
DC_1057
STR
13–406
DC_1057
AUR96764.1
1 406
Architecture
STR
STR 13-406
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.232.O._10N.261.51.E11
[NCBI] 		1881454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio tasmaniensis
[NCBI] 		212663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96764.1 [NCBI]
Genbank nucleotide accession
MG592596.1 [NCBI]
CDS location
range 30204 -> 31424
strand +
CDS
ATGACGGATCGTTATTTTAATAGTGTCGATTTTGCCGGGAGTGATGGGGGCGCTGGCTTTACTCTTGGCCCTGCGCAAAACGTATTTACCGGGTCCGATCGAGCAGCAGCAGAAGCAGCAAGGAATACATTCTTAGCCGATAACCCGTCTTGGTTAGCGACTTACAACGCTGACACCAGCTTAAACATTCGACTTGAGTTTACAGAAGGCACAACCGCCGTAGCTGTATATCAGGTTCGTAACGATGCTGGTAACGGTTGGTTAGATAACGAAAGCTTTGAGGCTTTACGCGGTGCGCCGGGTGAGGATGGCTCAGGGACTGACTTTGGCGGCGTATCTTCTAATCACATACCCGCAATTGATGAGGATGGACGACCTTATGATTCAGGGATTGATGTAACCGAAACCTCATTAGTAACACCCAAAGATTTACAGGTTGGTCTAGGTACAATCCTGCTTGGTCAATCTGCAAGCCCTGTTCATTCATTTAGCTCTGCTGGTGAAAACATTGTCTTCGGCAATAGAGTGTCAAATAGGCCATTTACTCCGGGTGGTTGGTCTGACGGTTCCGCTGGTGAGGATTGGGCTAGTTACCATCGTAAAGGTGGAACTTATCATGCTGCTGATGTTATTCAGGCTATTGATTCAGATCAACTGACCAACCCGTCATTCCCAACAACGCTAGGGACTAATCGTAGAGACTACAGAATTGGTATTAAAGCTGTTTCTGCTCAATCGAAGTGTTACGCGGTAATCAAACAATCGGGCATTGCGATATTTGAGAGTAAGCGTCAATCGCTAACTGTAGGCGATAACTCATTTGACCTTTCAGTTGTGAATGGATCTCAAGGGTTCTTTGATCTAATTGGCTCTGTTCAGTACACAGTTGAGTTTCTATCGGAAGATGGCGATATAGTTCTTCTTGGTGATGGCGTTACTGGAACTCCATATCTTGAGCTGGATTGGCAAGAGTGGGAAGATATTCGACAACCAGATCAAGATGACATTGACAATCTGCTAAGTCCTACATGGGGTGCTGTAGATTCGTCGGACCCTAATATTATTTACGGAGGGTTTAAGCAAACAGGTAGAATCCGCAAGCGCGAGTTAAGTGCGGGTGATGATACATGGTTTCAATCATCCATTAACCTTCCCGTACCAAGCGAAGCAGCATGGTCTGACTGGCAGAGTAGAGAGTCCTTGATATATGGAGATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0c43ce3be8a5b987835b63170404b71799b5ea2d4af30c22fe395a101195b0b4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7635
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank