Protein

View in Explore
Genbank accession
BAO04681.1 [GenBank]
Protein name
lytic tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPNGYNASAFPSSFKDPAYDQADQSAAAAVGIPAQWLSSIRTKGEKSNADQISGANAATPYQIIPSTRDAIIKQTGVDPYLSPQTAAYGAAYLLKQSLDRNGGNPILATAEYHGGTNRDAWGPKTMAYVKRVTGSSPNNANATPSWGDSSANGQNPYQLQAAPTVTAAPGSGESGPSPLAQLFNAYQNGKMTPDDAHAFEQDVKSGRVVLPAGMSVNQSQAQQSQTPTAPQQLVDAFNNGHMSDADAAQFQQDVKNGALRLPSGAKLTPAPPATAGRESGIAARGYVEGLSSAIDQYYEKGKAIANMPMDAIKAIGTGGGFVNAIDQLTGTHLASSMPGAQNPNPLAGAPKTVPDNSPTLQETANYRLNQVGAPTAQTDAERVLQAGAGGAGALTVPVPGMALKAIPTMVASGAAGGAVGEAVHQATGSQALGLAANLLTTVLSPAAASRVMKVIANEAPAGAAAIAGRTEPALPDGASARPADAAINPIPTAQRTESAQPVVAPTQPNAQVAAPDIASTGVAQPPTPSLAAQVNPGMPQVTNPALTALERERENLLPIAANAPSKGDPSLANQISVLEQRAFDSVAERTRELQDHGMKFGDARALAQKQLSGEMTAHQQMLANLQGQLDAAQAGSRAVQRLGEIDRQISQTPATSIAQRSAISSAIDEAMQPSAGARIIPGSNAQAAATAAQPAEAVPATTAAPAQSAAQDAAAASQSASTVNPAASPLSSAAQQFMTPEELAAQARKAVGAEGKPFGLDKRTAREVLATQGAPDAETLASAKRLGIADNLQPDHLTANQAYRELAQAIKSTPGSLARAEEMQGLQAVGQRAMQIIEDAGGTRDLSQLSSQVKSELMTMQQQLDQKAESLYKSIKQDVPAQMPAQAQNVLNFVQQRATDLGGAKNLSPIEKMIQAKLSPKESPITINGQPVRAADVGMPTQYQQPTYALLDDVRRDIGAGLRNQGPFKDADSGLLKALYKSVSEDQRSALSSVPGALEKFDAARSAVQMRKSVEDDLTSLFGKQLGDSVVGKLGTAMSSLPKGDETKLIELLKSVPASMRQQVTASGLGYAFGKATKNGDLNFKSFADWMDGLKKNSAAFNAVMGNLPAETRTQLLDLAKVSRGVSDATRESITTGRIMAAREELNAHADTLVGKVMNTAREAAVGHVGTAISAGAAHVAGPVGAGLSHAVISALSRGKPDVMKAADQLIASPEFQQLAREGATPSQQTIKATANSSAFRRLYDGARNASGANDPMARQRFLMGLIESTQSTSNNNTNR
Physico‐chemical
properties
protein length:1280 AA
molecular weight: 132234,40710 Da
isoelectric point:6,69333
aromaticity:0,03672
hydropathy:-0,33273

Domains

Domains [InterPro]
G3DSA:1.10.530.10
RBD
16–143
G3DSA:1.10.530.10 DC_0776 DC_0776
IPR023346
STR
18–133
IPR023346
IPR008258
ENZ
34–119
IPR008258
cd00254
ENZ
48–132
cd00254
BAO04681.1
1 1280
Architecture
STR
RBD
STR
STR
STR 16-133 | RBD 134-143 | STR 162-591 | STR 599-1278 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSK1
[NCBI] 		1417599 Uroviricota > Caudoviricetes > Firingavirus >
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAO04681.1 [NCBI]
Genbank nucleotide accession
AB863625.1 [NCBI]
CDS location
range 14505 -> 18347
strand +
CDS
ATGCCGAACGGATACAACGCAAGCGCATTCCCCTCCAGTTTCAAAGACCCAGCCTACGATCAGGCAGATCAGTCGGCCGCTGCCGCGGTAGGCATCCCTGCACAATGGCTCTCGAGCATCCGCACGAAGGGCGAGAAGAGCAACGCCGACCAGATTAGTGGCGCAAATGCGGCGACGCCATACCAGATCATTCCGAGCACGCGCGATGCGATCATCAAACAGACCGGTGTCGATCCCTATCTGAGCCCGCAGACAGCAGCCTACGGGGCAGCCTACCTGCTGAAACAATCGCTCGATCGGAATGGCGGCAACCCGATCTTGGCCACCGCCGAGTATCACGGCGGCACGAATCGCGATGCCTGGGGTCCGAAGACGATGGCGTACGTGAAGCGCGTCACCGGCTCCTCTCCGAACAACGCAAACGCGACGCCATCGTGGGGAGATTCGTCGGCCAACGGTCAGAATCCCTACCAGCTACAGGCGGCGCCGACCGTCACCGCAGCGCCGGGCAGTGGTGAAAGCGGTCCATCACCCCTCGCGCAGCTCTTCAATGCCTATCAGAACGGCAAGATGACGCCGGACGATGCGCATGCGTTCGAGCAGGATGTAAAGAGCGGCCGTGTGGTCTTGCCGGCTGGCATGAGCGTTAATCAGTCACAGGCACAGCAATCGCAAACTCCGACGGCGCCGCAGCAACTCGTCGACGCGTTTAATAATGGCCACATGTCTGACGCAGATGCTGCGCAGTTTCAGCAGGACGTGAAGAATGGCGCTCTGCGGCTGCCATCCGGCGCAAAGCTGACGCCAGCACCACCGGCCACCGCCGGCCGTGAGAGTGGCATCGCCGCGCGTGGCTATGTCGAAGGCCTGTCCTCCGCGATCGATCAGTACTACGAGAAGGGCAAGGCCATTGCCAACATGCCGATGGATGCCATCAAAGCGATCGGCACTGGCGGCGGCTTCGTCAACGCGATCGACCAGCTGACCGGCACGCATCTGGCTAGTTCGATGCCGGGCGCACAGAACCCGAATCCGCTCGCTGGCGCACCGAAAACGGTGCCTGACAACTCGCCAACGCTGCAGGAAACGGCCAACTATCGGCTGAACCAGGTTGGCGCGCCGACGGCCCAGACAGATGCCGAGAGGGTGCTGCAGGCCGGTGCTGGCGGCGCAGGCGCGCTTACTGTGCCGGTTCCTGGCATGGCCCTGAAGGCGATTCCGACCATGGTGGCTTCTGGTGCCGCTGGCGGCGCCGTGGGCGAGGCCGTGCACCAGGCCACCGGCAGTCAGGCGCTTGGACTCGCTGCCAACCTGTTGACGACTGTGCTCTCGCCGGCTGCCGCCTCGCGCGTGATGAAGGTCATCGCGAATGAAGCGCCAGCGGGAGCTGCGGCGATAGCCGGGCGCACTGAGCCGGCGCTGCCAGATGGCGCCAGTGCCAGACCAGCTGACGCAGCTATCAACCCCATACCGACGGCCCAGCGCACCGAATCTGCACAACCCGTGGTAGCGCCGACGCAGCCGAATGCCCAGGTCGCCGCACCTGATATTGCGTCGACTGGAGTTGCTCAGCCACCCACTCCTAGCCTAGCAGCGCAGGTTAATCCAGGGATGCCGCAGGTCACAAATCCGGCATTGACGGCACTTGAAAGGGAGCGGGAAAATCTTTTGCCAATCGCGGCAAATGCCCCGTCGAAAGGCGATCCTTCTCTAGCGAATCAGATTTCAGTTCTTGAGCAGCGCGCTTTTGATTCTGTCGCAGAGCGCACGCGCGAATTGCAGGATCATGGCATGAAATTCGGGGATGCTCGCGCGCTAGCCCAGAAGCAACTCTCCGGAGAAATGACTGCGCACCAGCAGATGCTGGCAAACCTGCAGGGGCAGTTAGATGCGGCCCAAGCTGGTTCGCGCGCTGTGCAACGTCTCGGAGAAATTGATCGCCAGATCTCGCAAACTCCGGCAACTTCGATAGCGCAGAGAAGTGCCATTTCTTCCGCTATTGATGAGGCTATGCAGCCATCCGCAGGCGCCAGGATAATTCCTGGGTCGAATGCTCAGGCTGCGGCTACCGCCGCGCAACCGGCAGAGGCCGTGCCGGCTACTACAGCAGCACCAGCGCAATCTGCTGCTCAGGATGCTGCCGCTGCAAGCCAATCCGCGAGCACGGTCAACCCTGCTGCTTCCCCGCTATCATCTGCGGCTCAGCAGTTCATGACCCCCGAGGAGCTCGCCGCGCAGGCTCGCAAGGCCGTCGGCGCCGAGGGCAAGCCGTTTGGCCTGGACAAGCGCACTGCGCGCGAGGTGCTGGCAACCCAGGGGGCGCCAGACGCGGAGACATTGGCATCAGCCAAGCGCTTGGGCATTGCCGACAACCTGCAACCGGACCATTTGACGGCCAACCAGGCGTATCGCGAGCTGGCGCAGGCCATCAAATCGACCCCAGGTAGCTTGGCGCGCGCAGAGGAAATGCAGGGCCTGCAGGCGGTCGGGCAGCGCGCCATGCAGATCATCGAGGATGCCGGCGGCACGCGCGATCTGAGCCAGCTCTCGTCGCAGGTCAAGAGCGAACTCATGACGATGCAGCAGCAGCTCGACCAGAAGGCTGAGTCGCTCTACAAATCGATCAAGCAGGACGTGCCGGCACAGATGCCGGCCCAAGCCCAGAACGTGCTCAATTTCGTTCAGCAGCGCGCGACAGATCTCGGTGGTGCGAAGAATCTATCGCCCATTGAAAAAATGATTCAGGCGAAGTTATCGCCGAAAGAGTCGCCCATTACGATCAATGGGCAGCCGGTGCGCGCGGCTGATGTGGGGATGCCAACCCAATACCAGCAACCGACATACGCGCTGCTGGATGACGTGCGCCGCGACATTGGTGCCGGACTGCGCAATCAGGGCCCATTCAAGGATGCCGACAGTGGTCTACTGAAGGCGCTCTACAAGAGCGTCTCTGAAGACCAGCGCAGCGCGCTATCCAGCGTCCCCGGTGCGCTTGAGAAATTCGACGCAGCGCGCTCCGCGGTGCAGATGCGCAAGAGCGTCGAGGACGATCTCACATCTCTATTCGGCAAGCAGCTCGGCGATTCCGTGGTCGGCAAACTCGGCACTGCGATGTCTTCTCTGCCCAAGGGCGATGAGACGAAGCTGATCGAGCTACTCAAGTCAGTGCCCGCCAGCATGCGCCAACAGGTGACTGCCAGCGGCCTAGGTTACGCATTCGGGAAGGCGACCAAAAACGGCGACCTGAATTTCAAATCATTCGCCGATTGGATGGATGGCCTGAAGAAAAACTCGGCCGCGTTCAATGCTGTCATGGGCAACCTGCCGGCCGAAACCAGAACGCAATTACTCGATCTGGCGAAGGTTTCGCGCGGCGTCTCGGATGCAACGCGCGAATCGATCACCACAGGCCGCATCATGGCCGCACGAGAAGAACTGAATGCGCATGCTGATACCCTGGTTGGCAAGGTCATGAACACCGCGCGCGAGGCAGCTGTCGGGCATGTAGGTACAGCGATCTCAGCGGGCGCGGCGCATGTCGCTGGGCCGGTTGGCGCCGGCCTGAGTCATGCCGTCATCAGCGCTCTGTCGCGCGGCAAGCCTGACGTGATGAAGGCTGCCGATCAGCTCATCGCATCTCCAGAATTTCAACAGCTTGCCAGAGAAGGTGCAACGCCATCACAGCAGACGATCAAGGCCACGGCAAATTCATCTGCGTTCAGGCGTCTCTATGATGGCGCGCGCAATGCATCTGGAGCTAATGATCCGATGGCGCGTCAGCGCTTTCTAATGGGTCTCATTGAATCCACACAATCGACATCCAACAACAATACGAACAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
06f6c3160a5a4ffdb6a3f031c278a876f4ead3313b8914f9acf8569f7eae5409
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6432
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dynamic genome rearrangements of T7-like phages that infect Ralstonia solanacearum Kotera,S., Fujiwara,A., Kawasaki,T., Fujie,M. and Yamada,T. 2015-02-13 — GenBank