Protein

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Genbank accession
AUR95863.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MPYNRRSGGGSGFELGPTQNVFSGVDRTAAELERDNYTTANPSWLADYEVSAGVKPNIRLEFLISGEPSAVYQVRNSAGTEWSDNESFIAIKGDTGDSDISNVGDGQIPVKDGETLVSSGMQKLPNGQILAPKNFGVESASIDFGDVITVSEQSSFLGIHDNSNGQSYIVVDFERNRDEPSRSPRIFTSTEAEVSEVVQADDSTELTGTSLTFDYTTTLTAYTNSITLRAQSEMTNVRIKITPQGSSVGLKYIPQKSSWISEAEGLTLTAGDNEIDLFDSSLALESGTTLTVEVRANAISLLGSASGIPYLSVKKQDASFKSLVVKGAPVGVLDGETLAVQPNSSISASFADPATTETITLNLDDGNHSGDEIEFVFANNLGTNTVVFNASSDIGFFDTNSNTFVFSPQLTLTGRSARVVFEWYGNDWRIVR
Physico‐chemical
properties
protein length:432 AA
molecular weight: 46347,28360 Da
isoelectric point:4,32996
aromaticity:0,08333
hydropathy:-0,25787

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR95863.1
1 432
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,8328
Central domain 199 397 200 0,0686
C-terminal 398 432 34 0,4862
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-397
C-terminal
398-432

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.214.O._10N.222.54.F11
[NCBI] 		1881264 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR95863.1 [NCBI]
Genbank nucleotide accession
MG592584 [NCBI]
CDS location
range 10429 -> 11727
strand +
CDS
ATGCCATACAATCGTAGATCTGGAGGTGGCTCTGGCTTTGAGCTAGGTCCAACTCAGAATGTATTTAGCGGAGTGGATAGAACTGCTGCCGAATTAGAACGAGATAATTACACAACTGCAAATCCTTCATGGCTTGCTGATTACGAAGTTAGCGCAGGGGTTAAACCTAATATACGCCTAGAATTTCTTATATCCGGAGAGCCGTCGGCAGTTTATCAGGTGCGAAATAGTGCCGGAACTGAATGGTCTGACAATGAAAGCTTCATAGCAATTAAGGGTGACACTGGCGACTCTGATATTAGCAATGTCGGAGATGGTCAGATACCAGTAAAAGATGGTGAGACCCTTGTTTCGTCCGGCATGCAAAAGCTGCCTAACGGTCAGATTCTAGCGCCTAAGAACTTCGGGGTTGAGTCTGCATCAATTGACTTTGGTGATGTCATTACAGTGTCTGAGCAAAGCTCGTTCCTTGGTATTCATGACAACTCAAACGGGCAAAGTTATATCGTTGTGGACTTTGAGCGAAACCGCGACGAGCCATCTCGCAGTCCTAGAATATTTACATCTACAGAGGCTGAAGTATCAGAGGTAGTTCAAGCTGACGATTCGACAGAGTTAACCGGCACTTCACTAACGTTCGACTACACAACTACCCTAACAGCTTACACGAACTCAATTACACTTCGAGCTCAGTCAGAGATGACCAACGTTCGAATTAAGATCACTCCGCAAGGTAGTTCGGTCGGTTTAAAGTACATCCCGCAAAAATCGTCTTGGATATCAGAAGCGGAAGGTTTAACACTAACCGCCGGTGATAATGAGATCGACCTGTTTGATTCATCGCTTGCGCTGGAGTCAGGTACCACATTAACTGTTGAGGTTCGAGCGAATGCTATTTCATTGCTAGGCTCTGCTTCAGGCATTCCATATCTGTCAGTTAAAAAACAGGACGCCAGCTTTAAGTCGTTGGTGGTTAAAGGTGCTCCAGTCGGCGTATTGGATGGCGAGACTCTAGCAGTTCAGCCAAACTCAAGCATTAGTGCATCGTTCGCCGACCCTGCAACAACGGAAACAATTACGCTAAACCTGGATGACGGCAACCACTCAGGCGATGAAATTGAATTTGTATTTGCTAACAACCTCGGCACAAACACGGTTGTATTCAATGCTAGTTCAGATATTGGATTCTTTGACACTAACAGCAACACGTTTGTATTTTCACCTCAACTAACGCTTACAGGTCGCTCTGCTAGGGTTGTTTTTGAATGGTACGGCAATGATTGGAGGATTGTGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
332f56c859b56e1e9d1940103ec837961f9e6b46954578130fa0406df6a0eb9c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5233
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank