Protein

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Genbank accession
YP_005098357.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSPIYVPGKVVLQKQFTAQGYMYDFPAQYNLWTPAEITTALWLDAADTSTVTTVNGAVSQWNDKSGNGRNAAQGTSSSRPTYTTNALNNKSVLTLDGTDDFMTVAHANALNAQIAPSTVAAIYKKSGGFRVMQKGDGAGLDDPDYYFNDNSLLSIAGGRASNYSANQDLWLIDIATWDGSTIKHYRDGTKLVASTVAGATIVDGEVDPDNTPLANTDGLYIGKRNSGSNEGNMTGQIAGIIICDSVLSTLDRQRLEGYYAHLFGLTANLPSDHPYKLVAPTP
Physico‐chemical
properties
protein length:282 AA
molecular weight: 30148,05700 Da
isoelectric point:4,85566
aromaticity:0,08865
hydropathy:-0,29752

Domains

Domains [InterPro]
DC_0797
STR
6–282
DC_0797
G3DSA:2.60.120.200
STR
50–255
G3DSA:2.60.120.200
IPR013320
STR
59–249
IPR013320
YP_005098357.1
1 282
Architecture
STR
STR 6-282
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBS4
[NCBI] 		756275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0101
[NCBI] 		232348 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_005098357.1 [NCBI]
Genbank nucleotide accession
NC_016766 [NCBI]
CDS location
range 46521 -> 47369
strand +
CDS
ATGAGCCCGATTTATGTGCCGGGGAAGGTGGTGCTGCAGAAGCAGTTTACGGCGCAGGGCTATATGTACGATTTTCCTGCCCAGTACAATCTATGGACCCCTGCAGAGATCACTACTGCATTGTGGCTGGATGCGGCTGACACCAGTACGGTGACGACAGTGAACGGAGCTGTTAGCCAGTGGAATGATAAAAGTGGCAACGGTAGAAATGCAGCCCAAGGGACTTCCAGTAGCCGCCCTACTTATACCACAAACGCTCTAAACAATAAAAGCGTTTTGACGCTCGATGGCACTGACGACTTTATGACGGTGGCACACGCCAATGCTCTTAATGCACAAATCGCACCTAGCACAGTTGCTGCTATTTACAAAAAGAGCGGCGGTTTCAGGGTAATGCAGAAAGGAGATGGCGCTGGGCTCGATGACCCTGATTACTACTTTAATGACAACAGCCTCTTATCTATAGCCGGAGGAAGAGCATCTAATTATTCCGCAAATCAGGATTTATGGTTGATTGATATTGCGACATGGGACGGCAGTACAATTAAACATTACCGTGACGGGACAAAGTTAGTCGCGTCAACCGTTGCGGGCGCCACTATTGTTGATGGCGAAGTTGATCCAGATAATACCCCGCTAGCTAATACTGATGGTTTGTACATTGGTAAGCGTAACTCAGGATCTAATGAAGGAAATATGACTGGCCAAATTGCCGGAATAATCATTTGCGATTCTGTTTTGTCCACCTTAGATCGACAAAGACTTGAGGGTTATTACGCCCACCTGTTTGGTTTAACCGCAAACCTCCCCAGCGACCATCCATACAAACTTGTAGCACCGACGCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
461c37846d402a6c2d72a52fc4e1db73316f6d744ff2fe4416373d0a96277eaf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8320
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50