Protein

View in Explore
Genbank accession
YP_009276740.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSQRQLSEYAVTAAVRDVIKTIARNEIQKARPASRLAAVQSIDPVDRSAQVIFVGETEPVRVPYTSKAPAFTGQFVRIGGTTHDRYIEDVIGQDFTSLELEKTKESVGKLMEAAYGEGWFEADPEELGITIGEYLTSLDNQGAVDALAQTVEQVETTANNASTAAGQAQTTANNASTAAGQASSDASTALGKANDAEAAAGAASSQAGAASSLAEAVQTVTQQIANNINALGEGVAEGVADVADIFATIGNIFGTAINAESKAIETQTKLQELIGSNEAGASGGKSGSDDFERPNSTTLGPNWVTQTMAGDLTLQIEDGNVRLLGGSDTTLAYARWVGSNDVISDYVQTTMVVGGGWGAAGTMYDYIFARWDGLFSGSGENTTPLNCWAARLEKSGVVTLIRVVNGSMVEFGSHDIGSTAIGDVMSLRCGSYTHSRQITVVYNGEPIISYTDLTEVSMMGPAYRKHGFSMFASNVFGVQRPARIASYSFSDIPGGGIILGKGFKYYRTNTNTVTTPAASLLPTSVFDSMIMSPAIEPPGGSYAWGQGEFIIPIEGWWEFTFTFGGTTPSIAANGALDVEPRLYYGQGTLNQFIEMENQRIPRGATSSGSVTTGPLVSSIRRYCIVGERVAPGNGPSGNHMANLTGAADGNRTAFSGILLSP
Physico‐chemical
properties
protein length:661 AA
molecular weight: 69403,26850 Da
isoelectric point:4,64252
aromaticity:0,07867
hydropathy:-0,12103

Domains

Domains [InterPro]
DC_0105
STR
57–661
DC_0105
IPR055681
STR
266–491
IPR055681
YP_009276740.1
1 661
Architecture
STR
STR 57-661
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009276740.1
1 661
Domain Start End Length (AA) Confidence
N-terminal 1 341 341 0,8272
Central domain 342 540 200 0,0720
C-terminal 541 661 120 0,9975
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-341
Central
342-540
C-terminal
541-661

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Demosthenes
[NCBI] 		1838067 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009276740.1 [NCBI]
Genbank nucleotide accession
NC_030944 [NCBI]
CDS location
range 36740 -> 38725
strand +
CDS
ATGAGCCAGAGACAGCTGAGTGAGTACGCGGTAACAGCTGCAGTCCGGGACGTCATCAAGACCATAGCGCGGAACGAGATTCAGAAGGCTCGTCCGGCCAGTCGGTTGGCGGCTGTCCAGTCGATTGATCCTGTCGATCGTTCTGCGCAGGTCATCTTCGTTGGCGAGACCGAGCCGGTGCGGGTACCTTACACCAGCAAGGCTCCTGCGTTCACTGGACAGTTCGTGCGTATCGGTGGCACGACTCATGATCGCTACATCGAAGACGTCATCGGTCAGGACTTCACTTCACTGGAGCTGGAGAAAACCAAGGAGTCCGTCGGCAAGCTGATGGAAGCTGCTTACGGCGAGGGCTGGTTCGAGGCCGACCCCGAAGAACTCGGCATCACCATCGGTGAGTACCTGACTTCGCTCGACAACCAGGGCGCTGTCGATGCTCTGGCACAAACGGTTGAGCAGGTCGAGACTACAGCCAACAACGCCAGCACTGCCGCTGGTCAAGCGCAGACCACGGCGAACAACGCCAGCACTGCTGCTGGTCAGGCTAGCTCGGATGCCAGCACTGCACTCGGCAAGGCTAACGACGCCGAGGCTGCAGCTGGTGCTGCGTCTAGCCAGGCTGGTGCGGCGAGCAGTCTCGCAGAGGCGGTCCAGACTGTTACCCAGCAGATCGCTAACAACATCAACGCCCTGGGCGAGGGTGTTGCCGAGGGCGTTGCCGATGTGGCGGACATCTTTGCGACCATTGGCAACATCTTTGGTACTGCTATCAACGCCGAGTCGAAAGCCATTGAGACCCAGACGAAGCTACAGGAGCTGATAGGCTCAAACGAGGCGGGAGCTTCGGGTGGCAAGTCTGGCAGTGATGATTTCGAGCGACCGAACTCCACAACGCTTGGTCCGAACTGGGTTACGCAGACGATGGCGGGTGACCTCACTCTGCAGATTGAGGATGGCAACGTTCGACTGCTCGGTGGTTCTGACACTACACTTGCGTATGCAAGGTGGGTCGGCTCGAACGATGTCATCAGTGATTACGTTCAGACCACTATGGTTGTCGGCGGCGGCTGGGGCGCTGCTGGTACCATGTATGATTATATCTTTGCTCGCTGGGATGGCTTGTTCTCGGGCAGCGGAGAGAACACCACGCCACTCAACTGCTGGGCAGCGCGACTAGAGAAGAGTGGTGTTGTTACACTAATCCGAGTTGTCAACGGGTCGATGGTTGAGTTCGGTTCTCATGACATCGGCAGCACTGCTATCGGCGATGTCATGAGTCTTCGGTGTGGCTCCTACACTCACAGTCGTCAGATCACTGTTGTCTACAACGGCGAGCCGATCATCTCCTACACAGACCTCACCGAGGTCTCGATGATGGGTCCAGCGTACCGCAAGCATGGGTTCTCGATGTTCGCGTCCAACGTCTTTGGCGTTCAGCGCCCGGCCAGGATTGCGAGCTACTCGTTCTCTGACATCCCCGGCGGTGGCATTATCCTGGGCAAGGGGTTTAAGTACTACAGAACTAACACGAACACAGTCACCACCCCAGCTGCATCGCTGCTTCCCACCTCAGTCTTTGACTCGATGATTATGTCTCCCGCCATCGAGCCACCAGGGGGAAGCTATGCCTGGGGTCAGGGGGAGTTCATCATTCCAATCGAAGGCTGGTGGGAGTTCACCTTCACGTTCGGAGGAACAACTCCTTCTATCGCCGCCAACGGCGCACTGGACGTAGAGCCGAGGCTTTACTATGGCCAGGGGACGCTCAATCAGTTCATTGAGATGGAGAATCAGCGAATACCAAGAGGGGCAACTAGCTCTGGTTCAGTAACGACTGGACCTCTCGTGTCCAGCATTCGCAGGTACTGTATCGTTGGCGAGCGTGTAGCCCCAGGCAACGGACCTTCGGGTAATCACATGGCAAACCTTACTGGCGCTGCGGATGGCAACCGCACTGCCTTCTCGGGCATTTTGCTTTCACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b30779996f0028fc04c856920b325c395f2af6cfed639636b78efab254230083
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7337
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50