Protein

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Genbank accession
YP_010076016.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTTEQKVAIREILKTKLSMGVSNVVFEKSDGTIRIMKGTRDADFMPTMQTGKLTESTWKESTDMIPVFDVELGAWRGFSIDKLISVNGMKVEHLLQFIGK
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11511,39290 Da
isoelectric point:9,00335
aromaticity:0,06863
hydropathy:-0,14902

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
YP_010076016.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage CM8
[NCBI] 		2591056 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010076016.1 [NCBI]
Genbank nucleotide accession
NC_054939.1 [NCBI]
CDS location
range 130423 -> 130731
strand -
CDS
ATGAAACTGACAACTGAGCAGAAAGTAGCAATTCGTGAAATTTTGAAAACTAAATTGTCCATGGGTGTTTCAAACGTAGTTTTTGAAAAGTCTGATGGTACTATTCGTATTATGAAAGGTACTCGTGATGCGGACTTTATGCCAACCATGCAAACCGGCAAATTGACTGAATCTACTTGGAAAGAATCTACTGACATGATTCCAGTATTTGATGTTGAACTTGGTGCATGGCGAGGTTTTTCTATTGACAAATTGATTTCTGTTAATGGTATGAAAGTTGAGCATTTACTCCAATTTATTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5dae769d74b94b2bc05e9c37301ed21f764117f13ca5eb5555b851c917dcd74a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8443
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A quest of great importance - developing a broad spectrum Shigella ssp. and Escherichia coli phage collection Kaczorowska,J., Casey,E., Neve,H., Noben,J.-P., Lugli,G.A., Ventura,M., van Sinderen,D. and Mahony,J. 2019-09-26 — GenBank