Protein

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Genbank accession
YP_009604379.1 [GenBank]
Protein name
head closure Hc3
RBP type
TSP
Evidence DepoScope
Probability 0,66
Protein sequence
MSIETRDNWASGSNNIAKPERLPENSVVKAVNMDPTNGGKFELRTGFVKVNDCAAGRAVFPLGAAILFVDGGDLKVFDARTNQGHVVGSVNPNGDVAGCEHNNQLYLSTPTESLRFDGNTVRQWGVPSPVYTIDLVDGHLPAGTYKIAVTAYGEQGEESGADAVAVSVPEGKAIQISCSDSRSCTVYCSSVNGSTLYAQGLVSLNTFIITSTVDNTQRFTTDEMTPMPPCSLLVSHHAVIVGAYNNIIVMTEPMWPHLTNPITRFIQLPRDITMLASVDTGVFVATDEETYWLTDVETDEPSSVRKTNFGAVRGTAVKLPDGRAAWFTRYGQAIGDASGNIELPNRVNYAPDIATDGAAGVLEHNGNQLVVTTLKGQTTTNSLGAGDFWQLEVIDNDQ
Physico‐chemical
properties
protein length:398 AA
molecular weight: 42651,07580 Da
isoelectric point:4,66577
aromaticity:0,07286
hydropathy:-0,16985

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009604379.1
1 398
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,8621
Central domain 91 289 200 0,0429
C-terminal 290 398 108 0,4180
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-289
C-terminal
290-398

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiR18
[NCBI] 		1752027 Uroviricota > Caudoviricetes > Kochitakasuvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009604379.1 [NCBI]
Genbank nucleotide accession
NC_041964 [NCBI]
CDS location
range 51653 -> 52849
strand +
CDS
ATGAGCATCGAGACGCGCGACAACTGGGCCAGCGGGTCCAACAACATTGCCAAGCCAGAGCGGCTGCCGGAGAACTCCGTCGTCAAGGCGGTGAACATGGACCCCACCAACGGCGGGAAATTCGAGCTGCGCACCGGCTTCGTCAAGGTGAATGACTGCGCTGCTGGCCGAGCCGTGTTCCCGCTCGGCGCGGCCATTCTGTTCGTCGACGGCGGCGACCTCAAAGTATTCGACGCCAGGACCAACCAGGGCCATGTCGTTGGGTCGGTTAACCCCAACGGTGATGTAGCCGGCTGCGAACACAACAACCAGCTGTACCTGTCTACCCCGACCGAAAGTCTTCGGTTCGACGGCAACACAGTTCGACAGTGGGGAGTACCGTCTCCGGTGTACACCATCGATCTGGTTGACGGGCACTTACCGGCGGGCACGTACAAAATAGCGGTGACTGCTTACGGCGAACAGGGTGAAGAATCCGGTGCTGATGCTGTTGCCGTGTCCGTACCCGAAGGTAAAGCGATCCAAATCTCGTGCAGTGACTCGCGGTCCTGCACGGTGTATTGCAGTTCTGTGAACGGATCGACGTTGTACGCTCAGGGGCTGGTCAGCCTGAACACGTTCATCATCACGTCCACGGTGGATAACACTCAGCGGTTCACTACCGACGAAATGACCCCTATGCCGCCGTGCTCGCTTCTTGTGTCGCACCACGCTGTCATCGTCGGAGCCTACAACAACATCATCGTGATGACCGAGCCGATGTGGCCGCACTTGACCAACCCCATCACTCGATTCATCCAGCTACCGCGCGACATCACCATGCTCGCCAGCGTTGACACCGGCGTGTTCGTTGCTACCGACGAGGAAACCTACTGGTTGACCGACGTTGAAACGGACGAACCGAGTTCGGTACGCAAGACGAACTTCGGCGCAGTGCGCGGGACCGCTGTCAAGCTGCCCGATGGCCGCGCGGCTTGGTTCACTCGGTACGGCCAAGCCATAGGCGATGCCAGCGGGAACATTGAACTGCCAAACCGGGTAAACTATGCTCCCGACATCGCGACCGATGGTGCTGCCGGTGTACTCGAACACAACGGAAACCAGCTGGTCGTCACTACCCTGAAGGGCCAAACGACCACCAATTCACTCGGAGCCGGAGACTTCTGGCAGCTTGAGGTAATCGACAATGACCAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ffe48a437014981628cc36feec64518315f91475f1f6e3f1d66f4051d440f7c9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8847
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50