Protein

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Genbank accession
QQO88450.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MFKFCDGYDHYAEIGVKGTALQGYLEAAGYVVRNASDTTFSVVEGRRTGARALKFTVAASSSVNASLSWGFTTTASSVVFGFAMKAGLSRMRIARIENIVDIEWDTTTGKIRVGEQLGVNPLILNAWYYFEIEIDKTANTVKVYANNELQLTVTPSSAPTTTYTIVWGQTGTAPNAGEQTLDDFYVIDGSGSRNNARLTPVEVTSRMPTADVSTQWDVVNASSSTPHYQIVSQLSPGGESKPYLQSNTAGATDMYRSNVTLPNNNQIFAVSVIAYARKGDLDDRKLGLVVNTEGGTPTEIQVPLTESYKYYQASFEQAPGGSDWNQNNVESLQFGIITR
Physico‐chemical
properties
protein length:339 AA
molecular weight: 36869,55320 Da
isoelectric point:5,01788
aromaticity:0,10029
hydropathy:-0,25398

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_ER6
[NCBI] 		2801574 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO88450.1 [NCBI]
Genbank nucleotide accession
MW355470 [NCBI]
CDS location
range 39814 -> 40833
strand -
CDS
ATGTTTAAATTCTGTGACGGGTACGACCACTATGCCGAAATCGGCGTGAAGGGTACGGCCCTACAAGGCTATCTGGAAGCCGCCGGGTACGTGGTGCGTAACGCCAGCGATACCACCTTTTCCGTTGTCGAGGGCCGCAGGACAGGTGCGCGTGCGCTGAAATTCACCGTGGCCGCCAGTTCATCGGTCAACGCCTCACTGTCATGGGGATTCACCACGACGGCCTCGTCGGTCGTCTTCGGATTTGCCATGAAAGCCGGGCTGTCCCGTATGCGTATCGCGCGTATCGAGAACATCGTGGACATCGAGTGGGACACCACGACCGGGAAAATCCGCGTAGGCGAGCAGCTAGGCGTCAACCCGCTGATCCTGAACGCATGGTACTACTTCGAAATCGAGATCGATAAGACCGCCAACACCGTCAAGGTCTACGCGAATAACGAATTGCAGTTAACCGTTACGCCATCGAGTGCGCCGACCACCACGTACACAATCGTTTGGGGCCAGACGGGTACCGCACCTAATGCTGGCGAACAGACACTGGATGACTTCTACGTGATTGATGGTTCCGGTAGCCGCAACAACGCGCGCCTGACTCCGGTCGAAGTGACCAGCCGTATGCCGACGGCCGACGTTTCTACGCAGTGGGACGTTGTGAACGCCTCGTCCTCCACGCCGCACTATCAGATCGTGTCACAGCTTTCCCCGGGCGGCGAGTCGAAGCCATACCTGCAATCGAACACCGCAGGGGCCACCGATATGTACCGTTCGAACGTGACGCTGCCGAACAATAACCAGATCTTCGCCGTATCTGTTATCGCGTACGCCCGTAAAGGCGACCTTGATGACCGTAAACTCGGTCTGGTGGTCAACACGGAAGGCGGTACGCCGACTGAAATTCAGGTGCCGCTTACCGAGTCGTACAAGTATTATCAGGCATCGTTCGAGCAAGCGCCCGGCGGAAGTGACTGGAACCAGAACAACGTCGAATCTTTGCAATTCGGCATCATTACGCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a9d37d3347557c0f9a1cde34e8b451b154847a011f112880383e1e08640feb22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8839
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank