Protein

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Genbank accession
YP_007677702.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAITYTDNGGGAPNGSDLEFTYTFPIIQTEDVKVALNGVTQATTKYAVDNVSNPTKITFNNTSVDSSVQETSGAPKSGVTVRVYRETTVGKANGDEDPKAVFAAGSSIRATDLNANQEQALFAIHELQSQPVLAEQIDTGAITSDKILDGTIATADIADSAITTAKINADAVNGTKIADDSINSEHYVDGSIDTAHIADSQITSAKIADGTIVSGDIANNAVITDKLNNLAVTTAKVADGAITSAKLASGTVATGDIAADAITSAKIADDQINSEHYVDGSIDTAHIADSQITSAKIADGTIVAGDLASNAVTTAKITDSNVTTAKIADSNVTTAKIAADAITGAKIADDQINSEHYVDGSIDTAHIADSQVTTAKIADANVTSAKIASNAVTTDKIADGELTTLAGMQSTTASNLASGTALTATTTELNQLDGITLETSVTTNSDTRIPTSKAVNDLVLSVTNALGGFVAIANETSFPTANPDPSNNAGTVVSISQLASGLAVNGSGVATISNGAGTGNTVTITGFPSSLVSQTLPATSGLQVQTTSTLHTYTFHKQLASAADIQAISATVNSFSNRYRVSASAPTSSLDGGDLWYDTTNSKLMVYSSQNSAWEESSAIGNFFISTISSSSNTGGGSATPNGTAYRFTISDAPVSAQQLLVSVDGVIQKPNSGTSQPSEGFALSGNDIIFGSAPANGASLFVTVIGSTVGIGTPSNNTVTTAILQNGSVTTAKIVDANVTTAKITDANVTTAKIADDAVTAAKLASSAVVTASIVDANVTTAKIADDAVTAAKLANTSVSAGSYGSSTSIPSITVDAQGRITAASGNSVNFDVVADTSPQLGGDLYANGNQIYIEDSTGSNHNRLKFGNSSDLQIYHDNNSKIHGSSGYTQLSAQNGSVYIDGNTIFLRSGDGSETYAKFVDDGKVELRFDDSIKFDTTSEGAAIYDSDGDSRLTFFTNGSSNRGSVYASSDSSVGFLNSSGSWSCRVDNNKSVHFYNHAYPQANNSYDLGSTSLRWRNIYTNDLHLSNEGSSNDVDGTWGDWTIQEGESDLFLKNNRSGKKYKFNLTEVS
Physico‐chemical
properties
protein length:1072 AA
molecular weight: 110231,56330 Da
isoelectric point:4,43534
aromaticity:0,05597
hydropathy:-0,16483

Domains

Domains [InterPro]
DC_1194
STR
2–229
DC_1194 DC_1335 DC_1194
IPR053336
Unmapped
257–398
IPR053336
DC_1335
ATT
330–681
DC_1335
YP_007677702.1
1 1072
Architecture
STR
ATT
STR
STR 2-229 | ATT 247-681 | STR 694-1072
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007677702.1
1 1072
Domain Start End Length (AA) Confidence
N-terminal 1 476 476 0,9490
Central domain 477 794 319 0,0926
C-terminal 795 1072 277 0,8740
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-476
Central
477-794
C-terminal
795-1072

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-GSP1
[NCBI] 		382262 Uroviricota > Caudoviricetes > Autographivirales > Lingvirus PGSP1 >
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007677702.1 [NCBI]
Genbank nucleotide accession
NC_020878 [NCBI]
CDS location
range 24913 -> 28131
strand -
CDS
ATGGCAATTACATACACCGATAATGGGGGTGGTGCGCCTAATGGTTCCGATTTGGAATTTACGTACACCTTTCCAATCATACAAACTGAAGATGTAAAAGTTGCTCTTAATGGAGTAACACAAGCGACAACTAAATATGCTGTTGACAATGTCAGCAACCCTACAAAAATAACTTTTAACAATACCAGTGTAGATAGTTCTGTACAAGAAACTTCTGGAGCACCTAAATCAGGTGTAACTGTTAGAGTTTATAGAGAAACAACCGTTGGTAAAGCAAACGGTGACGAAGATCCTAAAGCTGTATTTGCAGCCGGTTCTTCTATTCGTGCAACAGACTTAAATGCTAACCAAGAACAAGCTTTATTTGCAATACATGAGTTACAGAGTCAACCTGTTCTTGCTGAACAAATAGATACTGGAGCTATAACAAGTGATAAAATACTTGATGGAACTATTGCTACAGCAGATATAGCTGACAGTGCTATAACTACTGCAAAAATTAATGCAGACGCAGTAAACGGTACAAAGATAGCAGACGATTCAATCAATTCTGAGCATTATGTTGATGGTAGTATTGATACTGCTCATATTGCCGACAGTCAGATAACGTCTGCTAAAATAGCAGATGGTACTATTGTATCTGGAGACATAGCAAACAATGCTGTAATAACAGATAAATTAAATAATCTAGCTGTTACAACCGCAAAGGTTGCAGACGGTGCAATAACTTCTGCAAAACTAGCAAGTGGCACAGTCGCTACAGGTGACATAGCAGCAGATGCTATAACAAGTGCAAAGATAGCTGATGACCAGATTAACTCCGAACACTATGTAGACGGAAGTATAGACACAGCACACATTGCTGACAGTCAAATTACTTCTGCCAAGATAGCAGACGGAACTATAGTAGCCGGAGACTTAGCAAGCAATGCAGTAACTACAGCTAAGATAACTGATTCAAACGTTACAACTGCAAAAATAGCAGATAGTAATGTTACTACAGCTAAAATAGCAGCAGACGCAATTACTGGTGCTAAGATAGCTGACGATCAAATCAACTCAGAACATTATGTTGACGGATCTATAGATACAGCTCATATTGCTGATAGTCAAGTAACTACAGCAAAAATAGCTGACGCTAACGTTACATCAGCTAAGATAGCAAGTAACGCTGTTACAACTGATAAAATAGCTGACGGTGAGCTTACAACACTTGCTGGAATGCAGTCAACAACTGCGTCAAACCTAGCAAGCGGTACAGCTCTTACAGCTACTACAACAGAGCTAAACCAGCTTGATGGTATAACACTTGAGACTTCTGTTACTACAAACAGTGACACTCGTATACCTACATCAAAAGCTGTAAATGATCTTGTATTGTCTGTAACAAATGCTCTTGGTGGTTTTGTAGCTATAGCAAACGAGACTAGCTTTCCTACAGCTAACCCTGACCCAAGCAACAATGCTGGTACAGTTGTATCTATATCACAACTTGCAAGCGGTCTTGCAGTTAATGGTAGTGGTGTAGCAACTATATCTAATGGTGCTGGTACAGGTAACACTGTAACTATAACTGGATTTCCTAGCTCATTAGTTAGCCAAACATTACCAGCAACCAGTGGTTTACAGGTACAAACAACATCAACTTTACACACATATACATTCCACAAACAGTTAGCTAGTGCAGCCGATATACAAGCTATCAGTGCGACAGTTAACTCATTTTCAAACAGATACAGAGTGTCAGCTTCTGCACCTACATCTTCTCTAGATGGTGGTGACTTATGGTACGACACAACTAACAGTAAGCTTATGGTTTACTCTAGTCAAAACTCTGCATGGGAGGAGTCATCTGCGATTGGTAACTTCTTTATATCTACAATATCTAGCTCATCTAACACAGGTGGAGGAAGTGCAACACCAAATGGAACAGCTTATAGATTTACAATATCTGACGCACCAGTTAGTGCACAACAACTTCTTGTTAGCGTCGATGGAGTCATTCAGAAACCTAACTCAGGAACAAGTCAACCCAGCGAGGGCTTCGCTTTATCTGGTAACGACATTATATTTGGTTCCGCTCCTGCTAACGGTGCTAGCCTCTTTGTTACTGTCATCGGGTCAACAGTCGGAATAGGTACACCAAGTAACAACACAGTTACAACAGCAATCCTACAGAACGGATCAGTTACAACTGCAAAGATTGTAGACGCTAATGTTACAACTGCCAAGATTACAGATGCAAACGTAACTACAGCTAAGATTGCGGATGACGCAGTTACAGCAGCTAAACTTGCAAGTAGTGCAGTTGTTACAGCTTCGATAGTAGACGCAAATGTAACTACAGCTAAGATTGCAGATGACGCAGTGACTGCTGCAAAGCTCGCTAACACGTCTGTAAGTGCTGGTAGTTATGGTTCATCAACTTCTATCCCAAGCATCACTGTAGACGCTCAGGGACGTATCACAGCAGCATCTGGTAACTCTGTTAACTTTGATGTAGTCGCTGACACATCACCACAGCTAGGCGGTGACTTATATGCAAACGGAAATCAAATTTATATTGAAGATAGTACTGGTAGTAATCATAATCGACTTAAATTTGGTAATTCTTCGGATCTACAAATTTACCATGACAATAATAGTAAAATTCATGGATCTAGTGGATATACACAACTTAGCGCTCAAAATGGTTCTGTATATATTGATGGTAATACTATTTTTCTAAGATCTGGAGATGGCAGTGAAACATATGCTAAGTTTGTTGATGACGGAAAGGTTGAATTAAGATTTGATGACAGTATAAAGTTTGACACAACAAGCGAAGGAGCTGCAATTTATGACAGTGACGGTGATTCTCGATTAACCTTTTTCACAAATGGAAGTTCTAATCGAGGGTCAGTATATGCTTCTAGCGACAGTAGTGTAGGTTTTTTAAATTCATCAGGTTCGTGGTCTTGTAGAGTAGATAATAATAAATCAGTACATTTTTATAATCACGCATATCCACAAGCTAACAACTCTTACGATTTAGGTTCTACATCATTACGTTGGAGAAACATTTACACCAATGACCTTCACTTATCTAACGAAGGTTCATCTAATGATGTTGACGGAACTTGGGGTGACTGGACAATACAAGAAGGAGAATCAGACTTGTTCTTAAAAAATAATCGTTCTGGTAAAAAATATAAATTTAATTTAACGGAGGTATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
84296f77e754523f6a7a0c4ae635ef4b4c0ae0799f23dc1056c8e50c311ce871
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5727
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-GSP1 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank