Protein

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Genbank accession
YP_007675682.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKRIATTNKNNIWYDYLIFKVGDAISHLSRDWINVSGSNSEPNNSSSDWVSTSQNSSSLKETIAATEDQTVIELTTDPDSVEVFINQAYQIEEIDYTYLDGTITMTNTLYEGDIINVRKF
Physico‐chemical
properties
protein length:120 AA
molecular weight: 13612,75630 Da
isoelectric point:4,24214
aromaticity:0,10000
hydropathy:-0,46167

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phiSM
[NCBI] 		756280 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota
Host Cellulophaga sp. MM#3
[NCBI] 		192170 Bacteria > Bacteroidetes > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Cellulophaga

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007675682.1 [NCBI]
Genbank nucleotide accession
NC_020860.1 [NCBI]
CDS location
range 5596 -> 5958
strand +
CDS
ATGAAAAGAATAGCGACAACAAACAAGAATAATATTTGGTATGATTATCTTATATTTAAAGTAGGTGACGCTATCAGTCATCTAAGCAGAGATTGGATAAATGTTTCAGGCAGTAATTCAGAACCAAATAACTCAAGTTCTGATTGGGTTTCAACTTCACAAAACTCGTCATCTTTAAAAGAAACCATTGCAGCTACAGAAGACCAAACAGTTATTGAGTTGACTACTGATCCTGATAGTGTTGAAGTTTTCATTAACCAAGCATATCAAATAGAAGAAATTGACTACACGTATCTAGATGGAACAATTACGATGACGAACACCTTATACGAAGGAGATATTATTAATGTTAGAAAATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0642e75dee21128f71261e4d7afdb72c40ff3432d9d5277f515cf420d0056350
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5837
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cellulophaga phage phiSM Henn,M.R., Reimann,L., Holmfelt,K., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank