Protein

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Genbank accession
XSG66931.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQRYSPSIPPQEEEELLPFLNEEFVRVGQTLNDVADGYWGVSTEPPKKLKPGTIKYFAPGVVGPVSGIYYYDLDNQWKLAGTKPKDLPGEFILFTPANNHQAMGTCAYRMNTAKDEVWITLLASGGNYTNGATVLDLPQAYWPPAELFIPAFSSIIPAQSQITYPPPSDPNAPPLDQVFDVLNRATIQTAVVNQAMFKLTANGRLLIQGIPQGAIFGGTFTYPLVVTP
Physico‐chemical
properties
protein length:229 AA
molecular weight: 25066,24590 Da
isoelectric point:4,75000
aromaticity:0,11354
hydropathy:-0,14105

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phPSJM
[NCBI] 		3417223 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSG66931.1 [NCBI]
Genbank nucleotide accession
PV539787.1 [NCBI]
CDS location
range 33199 -> 33888
strand -
CDS
ATGAGTCAAAGGTACAGCCCCTCGATTCCGCCACAGGAAGAGGAGGAACTGCTGCCCTTCCTTAATGAGGAATTCGTTAGGGTTGGACAGACTCTCAATGATGTGGCTGATGGCTATTGGGGGGTTTCTACGGAGCCCCCTAAGAAGCTTAAGCCAGGAACGATTAAGTATTTTGCCCCTGGGGTAGTAGGTCCTGTATCAGGTATCTATTATTATGACTTGGATAACCAGTGGAAACTGGCAGGTACTAAACCCAAGGATCTCCCAGGGGAATTCATCCTATTCACCCCAGCTAATAATCATCAGGCTATGGGCACTTGTGCCTACCGGATGAATACAGCCAAGGATGAAGTGTGGATTACCCTTCTGGCATCTGGAGGGAATTATACTAACGGTGCTACGGTGTTGGACCTTCCCCAAGCCTATTGGCCTCCTGCGGAACTGTTCATCCCAGCATTCTCCAGTATCATCCCAGCCCAAAGCCAGATCACTTATCCACCACCCTCAGACCCTAATGCACCACCGCTGGATCAAGTATTTGATGTTCTTAATCGGGCTACAATCCAGACTGCTGTGGTCAACCAAGCGATGTTTAAGCTCACGGCTAATGGTCGTTTGCTTATCCAAGGAATTCCCCAAGGTGCTATCTTCGGGGGTACGTTTACTTATCCCCTAGTGGTGACTCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8e6c3c18892f7df0cc98ebab724a1c9f783599492bc064acc25a3aba622735e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7696
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of phPSJM Vukotic,G., Obradovic,M., Zrelovs,N., Plackic,N., Matijasevic,D., Kojic,M., Mutabdzija,J. and Stanisavljevic,N. — — GenBank