Protein

Genbank accession
CAB4183093.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence Phold
Probability 1,00
Protein sequence
MPTTNITVNRGTSGSTSYSITVTNQAETLAATIIPAYLSTTVSAAITVTGTSNAGPQGPTGPTGAASTVTGPTGALGPTGPTGAQGITGPTGGIGPTGVQGVTGPTGPTGAQGIQGVTGPTGPTGAQGVTGPTGPTGPTGAQGIQGPTGPTGPTGAASTVTGPTGADSTVTGPTGPQGNIGPTGAQGPTGAQGSQGIIGNTGPTGAQGPTGPTGPIGPTGADSTVTGPTGSAGPTGPTGPTGAASTVTGPTGSTGPAGQSSTFYNYQIKTSTTSGNPLDGHISYNNATQTSATQLQINHLDRSGNDIDLFLGLLKSGDPVYIQDQNDSANYQSWRVNGTVVDNGNSWLDVPVTLVASAGVGTTGFSNNHDVILVIASVGPTGPTGPTGAASTVTGPTGSQGPTGPTGATGSAGAASTVTGPTGPTGAAGGAGAAGSAGPTGAQGPTGAQGIQGTQGNTGATGPTGPTGPTGAASTVTGPTGPSGPTGATGPTGTFTVAQTVVTQTTSLSPVPSSDAGKMYYCTNGSAITLTVTSATAFSAGQSVDVLRYGAGTVTIVQGTGATVVGTPGLLLRAQYSAATIYCVAANSYVVIGDLSA
Physico‐chemical
properties
protein length:597 AA
molecular weight: 55802,92110 Da
isoelectric point:4,42465
aromaticity:0,03350
hydropathy:-0,12044

Domains

Domains [InterPro]
IPR050149
55–493
IPR050149
IPR008160
98–156
IPR008160 IPR008160
CAB4183093.1
1 597
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4183093.1 [NCBI]
Genbank nucleotide accession
LR797036 [NCBI]
CDS location
range 28013 -> 29806
strand -
CDS
ATGCCAACTACTAATATCACTGTAAACCGTGGTACTTCCGGATCTACTTCTTATTCTATTACGGTAACTAATCAAGCTGAAACCCTTGCAGCAACAATTATACCTGCTTATCTTTCTACTACGGTTTCTGCTGCTATCACTGTTACTGGAACGTCAAACGCCGGGCCACAGGGTCCAACCGGTCCGACAGGCGCTGCTTCAACAGTTACAGGCCCAACCGGCGCTTTAGGCCCTACAGGCCCTACGGGGGCACAGGGAATAACCGGACCTACCGGTGGTATTGGTCCAACTGGCGTTCAAGGCGTGACTGGTCCTACAGGCCCCACAGGAGCACAAGGGATCCAAGGTGTTACGGGTCCAACTGGTCCTACAGGAGCGCAGGGAGTCACAGGTCCAACTGGACCTACAGGGCCAACCGGAGCACAAGGTATTCAAGGTCCAACTGGACCAACAGGCCCAACAGGTGCAGCAAGTACCGTAACTGGTCCTACTGGTGCGGATTCTACAGTAACGGGTCCTACTGGACCACAAGGAAACATTGGTCCTACGGGGGCTCAAGGTCCAACAGGTGCGCAAGGCAGCCAAGGAATTATTGGAAATACTGGTCCCACAGGTGCTCAAGGCCCAACTGGTCCTACGGGTCCAATAGGTCCTACAGGTGCTGATTCGACCGTTACGGGCCCTACAGGTTCTGCCGGACCTACAGGGCCGACTGGTCCTACAGGCGCAGCTAGCACCGTTACGGGACCAACTGGATCAACTGGGCCAGCAGGACAGTCATCTACTTTCTATAACTATCAAATAAAAACCAGCACCACTAGCGGTAACCCTTTAGACGGGCATATTTCTTACAACAACGCCACACAGACTTCTGCTACACAGTTGCAGATAAACCATCTTGATCGATCAGGAAATGACATTGACTTGTTTCTCGGATTGCTTAAATCAGGTGACCCTGTTTACATTCAAGACCAAAACGACTCAGCTAACTATCAATCGTGGCGCGTCAACGGAACCGTTGTAGATAACGGAAACTCATGGCTTGATGTTCCCGTTACGTTGGTTGCATCTGCTGGCGTTGGAACAACTGGTTTCAGTAACAACCATGATGTGATTCTTGTTATTGCAAGCGTTGGTCCAACTGGACCAACAGGCCCAACAGGTGCTGCGTCTACTGTTACGGGTCCGACTGGTTCACAAGGACCGACTGGTCCTACTGGTGCTACTGGTTCTGCTGGTGCTGCTTCTACTGTCACTGGTCCTACTGGACCTACGGGAGCCGCTGGTGGTGCTGGTGCTGCTGGTTCTGCTGGACCTACGGGTGCGCAAGGTCCGACAGGTGCGCAAGGTATTCAAGGCACCCAAGGCAACACAGGTGCGACAGGTCCTACAGGACCTACAGGTCCCACGGGTGCTGCAAGTACGGTTACTGGACCTACAGGTCCTAGTGGTCCTACAGGGGCTACAGGTCCTACAGGGACATTTACTGTTGCTCAAACAGTTGTTACTCAAACCACAAGTTTAAGCCCTGTGCCATCTTCTGATGCAGGCAAAATGTATTACTGCACTAACGGTTCAGCGATTACTTTAACTGTTACTTCTGCTACTGCATTTTCTGCTGGTCAAAGCGTTGATGTTTTACGCTATGGTGCTGGGACAGTAACCATTGTCCAAGGAACAGGAGCGACAGTAGTGGGAACACCTGGTCTTCTTTTGCGGGCGCAATACTCGGCAGCCACAATTTACTGTGTTGCCGCTAACTCGTATGTTGTTATTGGCGATTTGAGCGCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
962e2492847c6aa0fe158d59815cf3d355e1a3267dded9ecb18e075bd7044aec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6590
Evidence 0,6590
Download PDB

Literature

No literature entries available.