Protein

View in Explore
Genbank accession
NP_073695.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MHRPPFNKLRTIDNLSAYKYHIDYLPTAMDESLTLLQKVNMLIYNVNQTNAITNDLAERWNEIIEWLNTEAISKEVEKILEKWLSDGTLADIITDAVLGDIEKIKLALAEFEQLKKDFDKLRYDVDSITQTSGNAIYQKLIMRPFFGTETEQIFSGAENAPQGMAYVEFKGKKYIFILSRVEGTTWTKAERHRITQFELTEDGSLTQPLTFTKPLELGHQGLSAMVDNDKIWLFAGYGYGDFENNGKGYTKIEWKGSNTDECDIYRYRLLGAHGSNERYNEYNHATPTISTDGRFIVLAVATTFEANTRYMLIFDRKQVERAENPMSVPALNIFQIYAAPYVGSHIVQDVACDGNYVYIYTSDVAPLGVKIITIMSMQGFVVGYYKVDGGLALYDSLTGDPRYGDAVQMEAEGLTIMGSDLLLLSTDVWQKDGQYTKRDKLVYKVYRGCATCEGEPINQGIQPLTSPASVHIRGTVHDVSFPYGDGFTVSQWDEQNNEIYPSLSYNGQSIFRIYDTRPDSNNELPMTLRNNKAPSGGWVEIRSGSTLEDGAGINMYNVTNSALGGRMRLYVTDPVTLESVYFQIYQNGAIVPSTDNLQNMGQXSNRMRNIYAGTGAINTSDERHKTDIAPISDKVLDAWEKVKFYQYKFKDAVDEKGEEARYHFGVIAQQIVKVFEDEGLSAFDYGLVGYDEWEATEDEYDSEGNLVEKGREAGNIYSIRPTECQWLEMACMRRKLERLS
Physico‐chemical
properties
protein length:740 AA
molecular weight: 83752,07830 Da
isoelectric point:4,86919
aromaticity:0,11096
hydropathy:-0,43315

Domains

Domains [InterPro]
DC_0396
ATT
1–185
DC_0396 IPR044914 IPR030392
IPR044914
RBD
541–605
IPR044914 cd10144
IPR036388
RBD
620–740
IPR036388
G3DSA:1.10.10.10:FF:001786
Unmapped
620–740
G3DSA:1.10.10.10:FF:001786
cd10144
CHP
620–735
cd10144
IPR030392
CHP
620–680
IPR030392
NP_073695.1
1 740
Architecture
ATT
RBD
ATT 1-185 | RBD 541-740
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_073695.1
1 740
Domain Start End Length (AA) Confidence
N-terminal 1 128 128 0,9919
Central domain 129 343 216 0,9860
C-terminal 344 740 396 0,6389
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-128
Central
129-343
C-terminal
344-740

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage GA-1
[NCBI] 		2679898 Uroviricota > Caudoviricetes > Salasmaviridae > Gaunavirus > Gaunavirus GA1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_073695.1 [NCBI]
Genbank nucleotide accession
NC_002649.1 [NCBI]
CDS location
range 12157 -> 14379
strand +
CDS
ATGCATAGACCGCCATTCAATAAGTTAAGAACAATTGACAACCTGTCTGCTTATAAGTATCACATTGATTACTTGCCTACAGCGATGGATGAGTCACTAACGTTACTTCAAAAAGTTAACATGTTAATTTATAACGTTAACCAAACAAATGCCATTACAAATGATTTAGCAGAACGTTGGAACGAAATTATCGAGTGGCTCAACACAGAAGCAATCAGCAAAGAAGTTGAGAAAATTCTTGAAAAATGGTTATCTGATGGAACGTTAGCAGATATCATTACTGATGCTGTTCTTGGCGACATCGAGAAAATTAAATTAGCTTTAGCAGAATTTGAGCAACTTAAAAAAGACTTTGATAAATTACGTTATGATGTTGATTCTATCACACAAACATCTGGAAACGCAATCTATCAAAAACTAATCATGCGTCCATTCTTTGGGACTGAAACAGAACAAATTTTTAGTGGTGCTGAAAATGCTCCACAAGGTATGGCTTATGTTGAGTTTAAGGGTAAAAAATACATTTTCATTCTGTCAAGAGTTGAGGGTACAACTTGGACTAAAGCAGAAAGACACCGTATTACTCAATTTGAGTTAACCGAAGATGGTAGTTTAACGCAACCACTAACATTTACTAAACCATTAGAGCTTGGACACCAAGGTTTATCTGCCATGGTAGATAATGATAAAATATGGTTATTTGCAGGTTATGGTTATGGTGACTTTGAAAACAACGGTAAGGGTTACACAAAGATCGAGTGGAAAGGTTCAAACACAGACGAGTGTGACATTTATCGTTATAGACTTCTAGGTGCTCATGGAAGCAATGAAAGATATAATGAATACAATCACGCAACACCTACTATTTCTACAGATGGTAGATTCATTGTACTAGCTGTTGCAACAACTTTTGAAGCTAATACTCGCTATATGTTGATCTTTGATAGAAAGCAAGTTGAACGAGCTGAAAACCCTATGTCTGTCCCTGCTTTAAACATTTTCCAAATCTACGCCGCACCTTACGTCGGTTCGCATATTGTTCAGGATGTAGCGTGTGATGGGAACTATGTATATATTTATACATCTGATGTAGCACCACTTGGAGTGAAAATTATCACCATTATGTCAATGCAGGGATTCGTTGTGGGTTACTATAAAGTTGACGGAGGTTTAGCACTATACGACTCCCTAACAGGCGACCCTCGTTATGGTGACGCCGTTCAAATGGAAGCAGAAGGTCTTACGATCATGGGTAGTGATTTACTGTTACTATCTACAGATGTTTGGCAGAAAGATGGACAATACACTAAAAGGGATAAGCTAGTTTATAAAGTGTATAGAGGTTGTGCTACATGTGAAGGTGAACCTATAAACCAAGGTATTCAGCCTTTGACTTCCCCTGCTAGTGTTCACATCAGGGGTACAGTTCATGATGTGTCATTCCCTTATGGTGATGGTTTCACTGTTTCACAGTGGGATGAACAAAATAACGAAATCTACCCTTCACTTTCTTATAACGGTCAATCCATTTTTAGGATTTATGACACACGTCCTGACTCTAATAATGAGTTACCTATGACTTTAAGAAACAACAAAGCACCTAGTGGTGGTTGGGTTGAAATTAGGAGTGGTTCTACTCTAGAAGATGGTGCAGGTATCAACATGTACAACGTAACAAATAGTGCGCTTGGCGGTAGAATGAGGCTCTATGTAACAGACCCTGTTACACTTGAATCTGTTTACTTTCAAATCTATCAAAATGGTGCTATTGTTCCAAGTACAGACAACTTACAAAACATGGGACAAKCTTCTAATAGAATGCGAAATATTTATGCGGGTACGGGTGCTATTAACACATCTGACGAGAGACATAAAACGGACATAGCCCCTATTTCTGATAAAGTATTAGACGCTTGGGAAAAGGTTAAATTCTACCAATACAAGTTTAAGGATGCTGTTGATGAAAAAGGCGAAGAAGCTAGATATCATTTTGGGGTTATCGCTCAACAGATTGTAAAGGTATTTGAAGATGAAGGACTAAGTGCTTTTGACTATGGACTCGTCGGTTACGATGAGTGGGAAGCAACAGAAGATGAATACGACAGCGAAGGTAACTTAGTTGAGAAGGGTAGAGAAGCAGGCAACATCTACAGCATAAGACCTACCGAATGTCAATGGTTAGAAATGGCATGCATGAGAAGGAAGCTTGAAAGGTTGAGTTAG

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Differential functional behavior of viral phi29, Nf and GA-1 SSB proteins Gascon,I., Lazaro,J.M. and Salas,M. 2000 10773070 GenBank
The switch from early to late transcription in phage GA-1: characterization of the regulatory protein p4G Horcajadas,J.A., Monsalve,M., Rojo,F. and Salas,M. 1999 10438592 GenBank
Functional characterization of the genes coding for the terminal protein and DNA polymerase from bacteriophage GA-1. Evidence for a sliding-back mechanism during protein-primed GA-1 DNA replication Illana,B., Blanco,L. and Salas,M. 1996 8969297 GenBank
Activation of replication origins in phi29-related phages requires the recognition of initiation proteins to specific nucleoprotein complexes Freire,R., Serrano,M., Salas,M. and Hermoso,J.M. 1996 8940089 GenBank
Transcriptional map of the Bacillus bacteriophage GA-1. Analysis of the viral C2 promoter Horcajadas,J.A., Meijer,W.J.J., Rojo,F. and Salas,M. 2001-12 — GenBank
The phi29 family of phages Meijer,W.J.J., Horcajadas,J.A. and Salas,M. 2001 11381102 GenBank