Protein

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Genbank accession
YP_009829455.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MSRLRIRDAKNVKWIDICQSEWRVRNPANTGWIRITPAQGIKARHGSEYYWLDIDCLAEEGTEDCGQDEYGGTPDGKGENGTGPGKPSTGGGDGSGGGGDGGGGDGGGNGGDNGSNNGGSGDGGGIDNGPDSPSFNDGDSGSGNGGSGWQEDAPYPPGFDLPDSDGDGAGDKGDCIYRPGLNTCETKQPIVVRPDMDCGTKRPGSWDCPFECPDSVSGSGAGISEFYINMGTASGNIKFPWIASAGASFDIYYRGKRVATTSGQRKGTGALTFVFNPVNNDPMLFVRVRSTYKTNTWTLQIKCVGDDDDDGTINNPRPCHGTFEVKKEGGQGTYEFYHNLGPTAGLTDIHYQMWNQPDKMEVFNHAGVLIASTGGYVAGEAHLKFQHTPGGSNMVRVRITARDPGTSWIYLITCPGEDGSEDNPRECSDTSAVKSGGAGVTDTFIDMGSTAGKVGIRYQMWQIPDKLDVYQEGTLVATTGGPVTGDHWLYFDYDPSRGQKIQVRVTGSGATSWSFLHTCPGDEDPNISVNSPSVREGAAGESPQLCWTITMDKPQSQPVTVDYATGGGNANPVAAQGRILASDQFNNPFIAVVDQANFGKVAFDGGFPKFYNSTYVAPQPPPTGAQVFNTWWRTAGAEFYTSPSGIPSGSEANAWAYSAGSGNISSTVNSANIISFISPTAYDSYTFEATLSSSAADDDMIGLVAAYARVGSDNYQIIASRQRGGLNAFGSNWSLALVKNNSVVKVLASNAVGGTGNWNGTRTRVRVQRDCNQINVWCSAYGSETISESTLLQADLTSEDLAVFGGAATRWGFTAQSQENATFSSIFVSGIGLPPAFTYLKNIALWSRKPGNSKALILCDSATVNQYNLGTAGMAFGVGMPETLRSVGFDVTMRYLPDMGNKITAADLADYGFLVVLSTDHTGVNHATGTSAAVVANWVKNGGGLFIVTDHDVFQATANALAAPYNIEFYASVDRSPVSVGQIIASHGDHPAWEGLSCKSIPAGGSEGAIRIKQVRSDYSPISGTVTFAPGETSKEVCAPIIGNDTQDGDRTINMNISNASKGNITVPTGTGTIIDDDSALCRQNPQGVVYERAGGGDGAYLMHVQPDYNCAAGNTKYLMMANLTFPYTGPYVITMTSDDDFELYIDCKKVASGPIGTRQYTVNINAGTRNVILRYLNVPNCTPGYAGFTARYNNLMVYSTRAADWKGQANSIGEIE
Physico‐chemical
properties
protein length:1217 AA
molecular weight: 128838,61060 Da
isoelectric point:4,81843
aromaticity:0,09367
hydropathy:-0,37058

Domains

Domains [InterPro]
DC_2160
ATT
1–309
DC_2160 DC_1887 IPR029062 IPR038081
G3DSA:2.60.120.200
STR
647–829
G3DSA:2.60.120.200 IPR038081
YP_009829455.1
1 1217
Architecture
ATT
STR
RBD
ATT
ATT 1-309 | STR 329-829 | RBD 882-994 | ATT 995-1088 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009829455.1
1 1217
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1029
Central domain 11 730 721 0,7456
C-terminal 731 1217 486 0,1456
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-730
C-terminal
731-1217

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009829455.1 [NCBI]
Genbank nucleotide accession
NC_022096.1 [NCBI]
CDS location
range 199276 -> 202929
strand +
CDS
ATGAGTCGTCTACGCATTCGAGACGCTAAGAATGTCAAATGGATTGACATTTGCCAGAGCGAATGGCGTGTGCGGAACCCAGCCAACACGGGCTGGATTCGTATTACTCCGGCGCAGGGCATTAAAGCTCGACACGGTAGCGAGTATTACTGGCTCGACATTGACTGTCTTGCAGAAGAAGGGACCGAAGATTGCGGCCAAGACGAATACGGCGGCACACCTGACGGTAAGGGTGAGAACGGCACCGGTCCGGGCAAACCCAGCACTGGAGGCGGAGACGGCTCCGGTGGAGGTGGCGATGGCGGCGGTGGAGACGGAGGCGGTAACGGCGGAGACAATGGCTCTAACAACGGCGGCTCTGGCGATGGCGGCGGTATCGATAACGGTCCGGATAGTCCGAGCTTCAACGATGGCGACTCCGGCTCCGGTAACGGCGGTAGCGGCTGGCAAGAAGATGCTCCGTACCCACCTGGCTTCGACCTGCCTGACTCTGATGGGGACGGTGCCGGCGACAAGGGCGATTGCATCTACCGCCCGGGTTTGAACACCTGTGAGACCAAGCAACCTATCGTTGTGCGTCCTGACATGGACTGCGGTACGAAGCGTCCCGGATCGTGGGACTGCCCGTTCGAGTGCCCGGATTCTGTTTCTGGCTCTGGCGCTGGTATTTCCGAGTTCTACATCAACATGGGCACCGCCTCGGGTAACATCAAGTTCCCGTGGATTGCCTCCGCTGGCGCTAGCTTCGATATTTACTATCGCGGCAAGCGGGTCGCAACAACCAGCGGCCAGCGTAAAGGCACTGGCGCCTTGACCTTCGTGTTCAACCCGGTGAACAACGACCCGATGCTGTTTGTCCGCGTGCGCTCCACGTACAAGACCAACACTTGGACGTTGCAGATCAAGTGCGTTGGCGATGACGACGATGACGGCACCATCAACAACCCGCGTCCGTGCCACGGCACCTTCGAAGTCAAGAAAGAAGGCGGGCAAGGCACCTACGAGTTCTACCATAACCTTGGGCCGACTGCTGGTCTGACGGACATCCACTATCAAATGTGGAATCAGCCAGACAAGATGGAAGTGTTCAACCATGCGGGCGTGTTGATTGCATCGACTGGTGGTTACGTTGCAGGCGAAGCTCACCTGAAATTTCAGCACACGCCTGGCGGGTCGAACATGGTGCGCGTGCGCATTACTGCGCGTGACCCAGGTACGTCTTGGATTTACCTGATCACCTGCCCAGGTGAAGACGGTAGCGAAGATAACCCGCGTGAGTGTTCCGACACCTCAGCAGTTAAGTCTGGCGGTGCAGGCGTCACAGATACCTTCATCGACATGGGTTCGACTGCTGGTAAAGTTGGCATCCGCTACCAGATGTGGCAGATTCCGGACAAACTGGACGTCTATCAAGAGGGTACGCTCGTTGCGACAACCGGAGGTCCTGTTACGGGAGACCACTGGCTGTACTTCGACTACGATCCGAGTCGCGGTCAGAAGATTCAGGTGCGCGTCACTGGCTCGGGCGCCACGTCGTGGTCGTTCCTGCATACGTGCCCCGGGGATGAAGACCCGAATATCAGTGTCAACTCGCCAAGCGTGCGTGAGGGTGCTGCAGGTGAGTCTCCGCAACTGTGCTGGACCATCACAATGGACAAGCCTCAGTCGCAACCAGTGACAGTGGACTACGCAACTGGCGGCGGCAACGCAAACCCGGTCGCTGCACAAGGTCGCATCTTGGCTTCCGACCAGTTCAACAATCCGTTCATCGCCGTTGTTGATCAAGCAAACTTCGGCAAAGTTGCGTTCGATGGGGGCTTCCCCAAGTTCTACAACTCGACCTACGTTGCACCGCAGCCGCCTCCGACGGGCGCACAGGTGTTCAACACATGGTGGCGTACTGCCGGTGCTGAGTTCTACACCAGCCCGAGCGGAATTCCTAGTGGTAGTGAAGCAAACGCATGGGCGTACAGTGCTGGGTCGGGCAACATCTCGTCCACAGTGAACTCCGCGAACATCATTTCCTTCATTTCGCCCACGGCATACGATAGCTATACCTTCGAGGCTACGCTGTCTTCTTCTGCTGCGGACGACGACATGATCGGCTTGGTTGCCGCATACGCTCGCGTCGGTAGTGACAACTACCAGATCATCGCTTCTCGCCAACGCGGCGGGTTGAACGCCTTCGGTAGCAACTGGTCGCTGGCTCTGGTGAAAAACAACTCTGTCGTGAAAGTGCTGGCGTCGAACGCTGTTGGCGGGACGGGAAACTGGAACGGAACACGCACCCGCGTTCGTGTGCAGCGCGATTGTAACCAGATCAACGTCTGGTGCTCGGCTTACGGTAGCGAGACAATCTCGGAAAGCACCTTGCTGCAGGCTGACCTGACCAGTGAAGATTTGGCAGTGTTCGGCGGTGCTGCTACTCGCTGGGGCTTCACTGCCCAGTCGCAAGAGAACGCCACGTTCAGCAGCATCTTCGTGTCTGGTATTGGCTTGCCGCCTGCGTTTACCTACCTGAAGAACATCGCCCTGTGGTCGCGTAAACCCGGCAACAGCAAAGCGTTGATTTTGTGCGACTCGGCTACGGTTAACCAGTACAACCTGGGCACTGCCGGAATGGCCTTCGGTGTTGGTATGCCGGAGACCCTGCGTTCTGTAGGCTTCGATGTCACTATGAGGTACCTGCCGGATATGGGGAACAAGATCACTGCCGCGGACTTGGCAGACTACGGCTTCTTGGTCGTGCTGTCTACAGATCACACCGGGGTCAACCACGCGACCGGCACCAGTGCAGCCGTCGTGGCGAACTGGGTGAAGAATGGCGGCGGTTTGTTTATCGTCACTGACCACGACGTGTTTCAAGCTACTGCGAATGCTTTGGCTGCTCCGTACAACATCGAGTTCTACGCTTCCGTCGATCGGAGCCCGGTGAGTGTTGGTCAGATCATCGCGTCGCATGGTGATCACCCGGCTTGGGAAGGGTTGAGTTGTAAGTCGATCCCAGCTGGCGGTAGTGAAGGTGCCATTCGCATCAAGCAAGTGCGCAGTGATTACAGCCCGATTTCAGGTACTGTTACCTTCGCGCCTGGTGAAACGTCCAAGGAAGTGTGTGCGCCGATCATCGGCAACGACACGCAGGATGGTGACCGTACCATCAACATGAACATCAGCAATGCGTCCAAGGGAAACATCACAGTGCCCACAGGTACTGGGACGATCATCGACGACGATAGTGCGCTGTGCCGGCAAAATCCGCAGGGCGTAGTGTATGAAAGAGCTGGTGGTGGAGATGGTGCTTACCTGATGCACGTTCAGCCTGATTACAACTGTGCGGCAGGCAACACGAAGTACCTGATGATGGCGAACTTGACGTTCCCGTACACGGGCCCGTACGTTATCACCATGACGTCCGACGATGACTTCGAGCTGTACATCGACTGTAAGAAGGTTGCGTCTGGTCCGATCGGTACTCGGCAGTACACCGTGAACATCAACGCAGGTACACGCAACGTCATCCTTCGATACTTGAACGTGCCAAACTGTACGCCTGGTTACGCTGGCTTTACCGCCCGCTACAACAACCTGATGGTGTACTCGACGCGCGCTGCTGATTGGAAGGGTCAAGCCAATAGCATTGGAGAAATCGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06ffdec8c04d2156205c2895f22be8aec49ec2ca4332f8681c90b0566c8e4cc5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6013
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50