Protein

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Genbank accession
AFH14479.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MRVPVGFALSSNQGKADTANTERLVNLFAEQQAPSSKSSAVLLRAPGTESMAELAFGSSVLGLHVFGEDLIAVTDKAMYRVKSGSKIPNYLGPVDFIGKTTVSIADNGIHVVVVDGDKGYYWSEADGVNLIDDEAFYPANTVTYQDGYFIFNREGTGQFFISKLLSVEFDALEFATAEGSPDDTVAVISNYRELWLFGTRSVEIWYNNGNVDFPFARLQGAFIERGCAAPRSITKVDSKITWLGDDGIIYMAAGYQPQRISTHAVEYSISQLARRDDAIGWWYSENGHVFYVITWPQDNITWCFDVTTGLWHERGHFDHGRHEANDCAYFDGMNVIGSFYVAELLELSQDLMKDRDRPLVVEATSMLTHNGRERMTARSFEVDMAVGRGRYPVPEDPQAMLQWSDDGGRTWSNEHWKSLGKMGEYRTRVKWNRCGMFRQRAWRITISDPVPVSIMSAWMEV
Physico‐chemical
properties
protein length:461 AA
molecular weight: 51869,61460 Da
isoelectric point:5,07120
aromaticity:0,12148
hydropathy:-0,28113

Domains

Domains [InterPro]
DC_1784
STR
3–461
DC_1784
IPR021098
STR
22–459
IPR021098
AFH14479.1
1 461
Architecture
STR
STR 3-461
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFH14479.1
1 461
Domain Start End Length (AA) Confidence
N-terminal 1 358 358 0,7883
Central domain 359 450 93 0,0473
C-terminal 451 461 10 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-358
Central
359-450
C-terminal
451-461

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VvAW1
[NCBI] 		1168281 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio vulnificus
[NCBI] 		672 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFH14479.1 [NCBI]
Genbank nucleotide accession
JQ801337 [NCBI]
CDS location
range 14042 -> 15427
strand -
CDS
ATGAGAGTACCGGTAGGCTTTGCGCTTAGCTCAAACCAGGGTAAGGCAGATACGGCAAACACTGAGCGGCTTGTAAACTTGTTTGCAGAGCAGCAGGCGCCTTCAAGTAAGTCGTCAGCTGTTTTATTGCGCGCACCTGGTACTGAGTCAATGGCAGAGCTCGCCTTTGGCTCAAGCGTGCTTGGGCTTCATGTGTTCGGCGAGGACTTAATAGCTGTAACCGACAAGGCGATGTACCGGGTTAAGTCTGGCAGCAAAATACCAAACTACCTTGGTCCGGTTGATTTTATTGGCAAGACAACCGTTTCTATTGCTGATAACGGCATCCATGTTGTGGTTGTTGATGGGGATAAGGGTTATTACTGGTCTGAAGCTGATGGCGTCAACCTGATTGATGACGAGGCTTTTTACCCGGCGAACACTGTCACTTATCAGGATGGCTATTTTATTTTCAACAGGGAAGGTACCGGGCAGTTTTTTATATCAAAGCTACTCAGTGTTGAGTTCGATGCTCTTGAGTTTGCGACAGCAGAGGGATCGCCAGACGATACCGTTGCCGTGATTAGCAACTACCGGGAGCTTTGGCTATTTGGTACGCGTAGCGTTGAGATTTGGTACAACAATGGGAATGTTGATTTTCCTTTTGCCAGACTGCAAGGCGCGTTCATAGAGCGCGGCTGTGCGGCGCCAAGGTCTATCACCAAGGTTGATAGCAAAATTACCTGGCTTGGTGACGATGGCATTATCTATATGGCGGCTGGATACCAGCCACAACGGATAAGCACGCACGCGGTTGAATATTCAATCAGTCAGCTTGCTCGCCGTGATGACGCTATTGGCTGGTGGTATAGCGAGAATGGGCATGTGTTTTATGTGATCACCTGGCCGCAAGATAATATTACCTGGTGTTTTGATGTGACTACCGGGCTTTGGCATGAGAGAGGTCACTTTGATCACGGCAGGCATGAAGCAAATGACTGTGCATACTTTGACGGTATGAATGTGATTGGGAGTTTCTATGTTGCAGAGTTGCTTGAGCTTTCCCAAGACTTGATGAAGGACCGAGATAGACCGCTTGTTGTCGAGGCAACGTCAATGCTTACGCATAATGGCCGGGAGCGCATGACAGCAAGAAGCTTTGAGGTTGATATGGCGGTTGGCCGTGGGCGATACCCAGTGCCAGAGGACCCGCAAGCAATGCTTCAATGGTCTGATGATGGTGGTAGAACATGGAGCAATGAGCACTGGAAAAGTCTTGGCAAGATGGGTGAATACCGGACGCGTGTTAAGTGGAATCGTTGCGGTATGTTCAGACAAAGGGCGTGGCGAATCACAATATCTGATCCTGTGCCTGTCAGCATTATGTCTGCATGGATGGAGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
35f43dd540a1438caedfc3c61865a8da175d5c77b65f6e79f8fb2062cb114822
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50