Protein

View in Explore
Genbank accession
QCW19282.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIVKLLYGGKAVFDPTGSSEITIGDVLKTFKLNANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYAKLANSNTFKAKQTITSNGEILTLVTPAEASSAYCALVGRDASNEKNWAIGNLIRGSFDVQIESRQGSILTLGTTVTINKTLAVVGQVKPSDFSNLDARYFTQTVANQRFAQLAGNNTFSGYNTFNQLSVFKKDGEAIRLQNANAAQPLYIKAIDSAGVNRWYIGNSNEGDNVALENYKTSGKITVGTSVNINKTLTVTGQVQPSDWANIDSRYIPAATLSTIARTNATNTFSGTQNIQSDGNALRLRNKIANNAQYIEGVNLDGSARWWVGIGSNGADAVNLYNNKYNSALTVASNISVNKSLAITGQVQPSDFSNLDARYFTQSASDSRYLRIRSTNFNNGNDEKWAKIATVVMPQSASTAVIEVFGGAGFNYGVLDQACKTEIVLRTGNERLKGLNIVAWKNSENPIITDIGSVNTSGDTYDIYCKVGSFQNATTSRVQSTSNAGVQLFEVPQTFDDAPQGIVKGTIAKYYTSMQKPTPSDIGAYTKAETDQKIAQAVSDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFSATTSSFDYGTKTTNTTGAHTHSVSGSTNNTGAHTHTVGGHYGGDSIGGKQRVQVSGTQQVSSSAGAHSHTVSGTAASNGNHAHTVGIGAHSHTVSGNTGGTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:841 AA
molecular weight: 89760,28600 Da
isoelectric point:8,87338
aromaticity:0,07729
hydropathy:-0,34447

Domains

Domains [InterPro]
DC_1993
STR
101–362
DC_1993 G3DSA:6.20.80.10 IPR051934
IPR048388
ATT
176–248
IPR048388 G3DSA:6.20.80.10 IPR048388 IPR005003 IPR005003 IPR005003 DC_2042
IPR048388
ATT
275–356
IPR048388 IPR005003 IPR005003
DC_0026
STR
304–781
DC_0026
QCW19282.1
1 841
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
RBD
STR 101-175 | ATT 176-248 | STR 249-274 | ATT 275-356 | STR 357-380 | ATT 381-466 | STR 467-781 | RBD 782-841
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW19282.1
1 841
Domain Start End Length (AA) Confidence
N-terminal 1 495 495 0,4354
Central domain 496 694 200 0,2854
C-terminal 695 841 146 0,9930
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-495
Central
496-694
C-terminal
695-841

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage DaR-2019b
[NCBI] 		2571169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW19282.1 [NCBI]
Genbank nucleotide accession
MK965970.1 [NCBI]
CDS location
range 20492 -> 23017
strand +
CDS
ATGGCAGATTACAAGTTGAGTGAATTAAACTCAATCGATACAATCCGTTCAGATGACCTTCTTCATGTCAGGGTTAAAAAGAGACCTGAAATGCTGGGTGATGAAGACCGTCGAATGACCTATCAAGATTTCTTAGCATCTTTTAAGCTTGAAAGATTTGTTCAGATTGCTGGTAGTACTATGACTGGCGACTTAGGAATTGTTAAGTTACTTTATGGTGGTAAGGCAGTATTTGACCCAACAGGTTCTTCTGAAATTACTATTGGGGATGTTTTAAAGACTTTTAAACTTAACGCAAATGGTCTTAAACTAACTATTGCAGATGCTTCAAGGTCGGCAACTGTTTATCATACTTTGAATAAGCCAAGCCCTAATGAACTTGGTATGAGGACTAATGAAGAGAATGATGCAAGATATGCAAAACTGGCTAACTCGAATACGTTTAAAGCCAAGCAAACTATTACATCGAATGGTGAGATTTTAACGCTAGTCACCCCTGCGGAGGCGAGTTCAGCGTACTGTGCCCTTGTAGGTAGAGACGCGAGTAATGAAAAGAATTGGGCTATTGGGAACCTAATTAGAGGCAGCTTTGATGTTCAAATCGAGAGTAGACAAGGTTCCATCCTCACTCTAGGTACAACTGTAACGATTAATAAGACCCTTGCTGTTGTTGGTCAGGTCAAACCTTCTGACTTCTCTAACTTAGATGCTAGATACTTTACTCAGACAGTTGCTAATCAGAGATTTGCACAGTTAGCTGGTAATAATACATTTAGTGGCTATAACACATTCAACCAACTAAGTGTTTTCAAAAAAGATGGTGAAGCAATTAGGCTACAGAATGCCAATGCTGCACAACCATTGTACATTAAAGCGATTGATAGCGCAGGTGTCAACAGATGGTACATTGGTAATAGTAACGAAGGTGATAACGTAGCTCTAGAAAACTACAAAACTAGTGGCAAGATTACTGTAGGGACAAGTGTTAATATCAATAAAACACTAACTGTAACTGGTCAAGTCCAACCTTCAGATTGGGCTAACATTGACTCTAGATATATTCCGGCAGCAACATTAAGTACGATTGCAAGAACTAATGCAACCAATACATTCTCTGGGACTCAGAACATTCAAAGTGATGGTAACGCACTTCGCCTTAGAAACAAGATTGCAAATAATGCACAATACATTGAGGGTGTAAACCTAGATGGTTCAGCTAGATGGTGGGTTGGTATTGGTAGCAATGGCGCTGATGCAGTAAACCTGTATAACAACAAATATAATTCAGCCTTGACTGTTGCAAGCAATATCTCTGTTAACAAATCTTTAGCAATCACTGGTCAAGTACAACCTTCAGATTTCTCTAACTTAGATGCTAGATACTTCACTCAAAGTGCTAGTGATAGTAGATACCTGAGAATCAGAAGTACTAACTTCAATAATGGAAACGATGAAAAGTGGGCTAAAATTGCTACTGTTGTAATGCCGCAATCCGCATCTACTGCGGTGATTGAAGTGTTTGGTGGGGCAGGTTTTAACTATGGTGTACTTGACCAAGCTTGTAAAACGGAAATTGTTCTCAGAACAGGGAATGAGAGACTAAAAGGTTTAAATATTGTTGCTTGGAAAAACTCGGAGAATCCCATTATTACGGATATCGGCTCTGTGAATACTTCTGGAGACACTTATGATATTTACTGTAAGGTCGGTTCGTTCCAGAATGCTACAACATCAAGAGTCCAATCTACTAGTAATGCAGGTGTACAGTTGTTTGAAGTACCACAAACATTTGATGACGCTCCGCAAGGTATTGTAAAGGGTACAATTGCAAAATACTACACAAGTATGCAAAAACCAACTCCTTCAGATATTGGTGCATACACTAAAGCAGAAACTGACCAGAAGATTGCACAGGCAGTAAGTGATTCAACAGACCTTAATAAAATCTACCCTGTTGGTATTGTAACTTGGTTTAACAGTAACGTTAACCCTAATACCGCACTTCCTGGATTAACTTGGACGTACCTGAACAATGGTGTTGGTAGAACTATTAGAATTGCAGCAGCAAACGGTTCAGATGTTGCTACAACTGGTGGTTCAGATTCTGTAACGCTAGCAGTTGGAAACTTGCCTTCACACACTCATAGTTTCTCTGCGACAACCTCTAGCTTTGACTACGGTACTAAAACCACTAACACTACTGGTGCTCACACCCACTCAGTGAGCGGTTCTACTAACAACACCGGTGCTCATACACATACTGTAGGTGGTCACTACGGGGGTGACTCTATTGGTGGTAAACAACGTGTTCAGGTATCTGGTACACAACAGGTATCTAGCTCTGCTGGTGCTCACTCTCACACTGTATCTGGTACTGCTGCCTCTAACGGAAACCATGCTCACACAGTTGGTATTGGTGCTCACAGTCATACAGTTAGTGGTAACACTGGTGGTACAGGTTCTGGTTCAGCATTTAGTGTAACTAACCAGTTCTATAAGCTGATGGCTTGGGTAAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc49132b0ec92ef27ecacb94de5e190fdcdcc8edd2490932fd70a35dbc1d99d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Two Phages of the Genera Felixunavirus Subjected to 12 Hour Challenge on Salmonella Infantis Showed Distinct Genotypic and Phenotypic Changes Rivera,D., Hudson,L.K., Denes,T.G., Hamilton-West,C., Pezoa,D. and Moreno-Switt,A.I. — — GenBank