Protein

Genbank accession
YP_009221784.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MVKYNVHKALAEKKLLEDKIDRCISNFKIVGTKKGSDKNVYETKTSVEDFNVEVSSRYQQIEDLIYNYNALDKAINISNAITNVQIGNKNYTVLEAIKRKNSIELDKSLLRQMVSNYDCMMSEVNRRNEEVQKNTDRMFEEKEKSKDGAELISFYKKQQEWSLVDPLKVREKIEKLRDEIEEFEKEVDFALSTSNALTIIDVDLK
Physico‐chemical
properties
protein length:205 AA
molecular weight: 23949,94280 Da
isoelectric point:5,52273
aromaticity:0,07317
hydropathy:-0,71561

Domains

Domains [InterPro]
Coil
121–141
Coil Coil
YP_009221784.1
1 205
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD211
[NCBI] 		1582152 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009221784.1 [NCBI]
Genbank nucleotide accession
NC_029048.2 [NCBI]
CDS location
range 6279 -> 6896
strand +
CDS
ATGGTTAAATATAATGTTCATAAAGCTTTAGCAGAAAAGAAGTTATTAGAAGATAAGATAGATAGATGCATTAGTAATTTTAAAATTGTAGGTACTAAAAAAGGCTCTGATAAAAATGTATATGAAACAAAAACAAGTGTAGAAGATTTTAATGTAGAAGTTTCAAGTAGATACCAACAAATAGAAGATTTAATATATAATTATAACGCATTAGATAAAGCAATTAATATCTCTAATGCTATAACAAATGTTCAAATTGGTAATAAAAATTATACAGTTTTAGAAGCAATAAAAAGAAAAAATAGTATAGAATTAGATAAATCCTTGTTGAGACAAATGGTTAGTAACTATGATTGTATGATGTCTGAAGTAAATCGTAGAAATGAAGAAGTGCAAAAAAATACAGACAGAATGTTTGAGGAAAAAGAAAAAAGTAAAGATGGAGCAGAACTTATTTCATTTTATAAAAAACAACAAGAATGGTCTTTAGTAGACCCTTTAAAAGTAAGAGAGAAAATAGAAAAATTAAGGGATGAAATAGAAGAATTTGAAAAAGAAGTTGATTTTGCATTGAGTACATCAAATGCACTTACAATTATAGATGTAGATTTAAAATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8cf5c29026045bbc44f5176ebc9fe3de2b5c83ad49cd16800790676a4745df2d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9345
Evidence 0,9345
Download PDB

Literature

Title Authors Date PMID Source
High prevalence and genetic diversity of large phiCD211-like prophages in Clostridium difficile Garneau,J.R., Sekulovic,O., Dupuy,B., Soutourina,O., Monot,M. and Fortier,L.C. 2018-02 — GenBank