Protein

Genbank accession
AFB83244.1 [GenBank]
Protein name
tail hub B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVAGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSQQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 91974,72000 Da
isoelectric point:6,04843
aromaticity:0,10775
hydropathy:-0,32542

Domains

Domains [InterPro]
IPR058003
1–817
IPR058003
AFB83244.1
1 826
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae-TbilisiM32
[NCBI] 		1141525 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFB83244.1 [NCBI]
Genbank nucleotide accession
JQ307386 [NCBI]
CDS location
range 26207 -> 28687
strand +
CDS
ATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCGGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGATCCCGTGTCAGGACTTCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGCGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCCAACGATTACAGGCAGCTACGGGCCGCCACGGTGGCCGATGACCTGTTCATCGCCAACCTGAGTGTAAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGCTGGTTGTACATCAAGGCGGGTCAGTATTCGAAGGCATTCTCTATGACCATCAAGGTCAAGGATAACGCCACGGGCACCACCTACAGCCACACGGCCACTTACGTGACGCCGGACAACGCCAGCACCAACCCCAACCTTGCCGAGGCACCGTTCCAAACGAGCGTGGGCTACATCGCTTGGCAGCTCTACGGTAAGTTCTTCGGGGCGCCGGAGTACACTCTGCCCAACTCGACGAAGAAGTACCCGAAGGTGGACCCGGACGCCAACGCGGCAACCATAGCCGGCTACCTCAACCAACGGGGCGTGCAGGACGGGTACATCGCATTCCGTGGCGACGCCGATATCCACGTTGAAGTGTCCACGGATATGGGCAACAACTACGGCATCGCGTCAGGTGGTATGAGCCTCAATGCTACGGCGGACCTGCCGGCCTTGCTGCCGGGAGTCGGTGCCCCTGGTGTGGGGGTGCAGTTCATGGACGGCGCTGTCATGGCCACCGGCTCCACCAAGGCCCCGGTATACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCAGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCACTGGCCCTGCGCTGGGATGAGGCTACCGACACCTACAGCTTGAACGAGCTGGAGTATGATCGACGTGGCTCCGGCGACGAGGATACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTCCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAATCCACACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCGGCCCAAGGGAGCCTGACTGAGCCGTACGAGCACGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCCGGTGGCGGCATTGTAACTCCCCGGACGGCGGTTATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGCAGTGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCATGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAAGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTTGGTACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTACAGAACGCGTTTCATCGCTGGACGTTGCGGCACCAGATCATTGGCGCCTACTTCACTGGCGACAACCTGATGGTTCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGCCGTATGCACCTGAACAGCCTGCCAGCCCGTGAGGGTCTGCAATACCCTAAATACGACTACTGGCGGCGTATCGAGGCGACCGTCGCTGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTGTATCAGCTACAGCCCGTGGCCGGCGCCTACATGGAGCGTACCCATCTCGGTGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTGGTCGGGGCGGTGTATGTGGTCGGCTGTGAGTTCTGGTCGAAGGTGGAGTTCACTCCGCCGGTTCTCCGGGACCACAATGGCCTGCCCATGACCTCGACCCGTGCAGTGCTTCATCGGTACAACGTAAACTTCGGCTGGACCGGCGAGTTCCTGTGGCGCATCAGCGACACGGCTCGACCCAACCAGCCGTGGTACGACACGACGCCCCTTCGGTTGTTCAGCCAGCAACTCAATGCCGGGGAGCCTCTGGTGGATAGCGCTGTGGTGCCGCTGCCGGCACGGGTCGATATGGCCACGTCCAAGTTCGAGCTGAGCTGTCACAGTCCGTACGACATGAACGTTCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAACCTACAGGAGGGTGTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5077acc0ed0f9583f1e8238c023e190fc108d4d2855ab7b33699ccdeacb7a722
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8483
Evidence 0,8483
Download PDB

Literature

Title Authors Date PMID Source
Characterization of lytic Pseudomonas aeruginosa bacteriophages via biological properties and genomic sequences Karumidze,N., Thomas,J.A., Kvatadze,N., Goderdzishvili,M., Hakala,K.W., Weintraub,S.T., Alavidze,Z. and Hardies,S.C. 2012 22562168 GenBank