Protein

View in Explore
Genbank accession
ASZ78264.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MRKLTKFKFFYNTPFTDYQNTIHFNSNKERDDYFLNGRHFKSLDYSKQSYNFIRDRMEINVDMQWHDAQGINYMTFLSDFEDRRYYAFVNQIEYVNDVVVKIYFVIDTIMTYTQGNVLEQLSNVNIERQHLSKRTYNYMLPMLRNNDDVLKVSNKNYVYNQMQQFLENLVLFQSSVDLSKKFGTKKEPNLDTSKGTIYDNITSPVNLYVMEYGDFINFMDKISEYPWITQNFQKVQMLPKDFINTKDLEDVKTSEKITGLKTLKQGGKSKEWSLNDLSLSFTKLQEMMLSKKDEFKHMIRNEYMTIEFYDWNGNTMLLDAGKISEKTGVKLRTKSIIGYHNEVRVYPVDYNSAENDRPILAKNKDILIDTGSFLNTNITFNSFAQVPILINNGILGQSQQAYRQKNAESQLITSRIDNVLNGSDPKSRFYDAVSVASNLSPTALFGKFNEEYNFYKQQQAEYKDLALQPPSVTESEMGNAFQIANSINGLTMKISVPSPKEITFLQKYYMLFGFEVNDYNTFIEPINSMTICNYLKCTGTYTIRDIDPMLMEQLKAILESGVRFWHNDGSGNPMLQNPLNNKFRKEV
Physico‐chemical
properties
protein length:587 AA
molecular weight: 68642,08380 Da
isoelectric point:6,44738
aromaticity:0,12777
hydropathy:-0,54753

Domains

Domains [InterPro]
IPR031772
TAS
3–115
IPR031772
DC_0080
STR
84–428
DC_0080
ASZ78264.1
1 587
Architecture
TAS
STR
TAS 3-83 | STR 84-428 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SA4
[NCBI] 		930196 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASZ78264.1 [NCBI]
Genbank nucleotide accession
MF001367.1 [NCBI]
CDS location
range 6185 -> 7948
strand -
CDS
ATGAGAAAATTAACAAAATTTAAATTTTTCTATAACACACCGTTTACTGATTATCAAAATACGATTCATTTTAATAGTAATAAAGAACGTGATGATTATTTTTTAAATGGACGTCATTTTAAATCATTAGACTATTCCAAACAATCGTATAATTTTATACGTGATAGAATGGAAATCAATGTTGATATGCAGTGGCATGACGCACAAGGGATTAACTACATGACGTTTTTATCAGATTTTGAGGACAGACGTTATTATGCGTTTGTGAATCAAATCGAATATGTGAATGATGTTGTGGTTAAAATATATTTTGTGATTGATACTATTATGACGTATACACAAGGTAATGTATTAGAACAACTCTCAAATGTGAATATTGAACGTCAACACTTATCAAAACGCACGTATAACTATATGTTACCAATGTTACGTAACAATGATGATGTGTTAAAAGTATCAAATAAAAACTATGTGTATAACCAAATGCAACAGTTTTTGGAAAATTTAGTGTTATTCCAGTCAAGCGTTGATTTATCAAAGAAATTTGGTACGAAAAAAGAGCCAAACTTAGATACGTCTAAAGGTACGATATATGACAATATCACATCACCAGTCAACTTATACGTTATGGAATATGGTGACTTTATTAACTTTATGGATAAAATAAGTGAATATCCATGGATTACACAAAACTTTCAAAAGGTTCAAATGTTACCTAAAGATTTTATTAATACAAAAGATTTAGAGGACGTTAAGACAAGTGAAAAAATTACTGGATTAAAGACGTTAAAACAGGGTGGAAAATCAAAAGAATGGAGTTTAAACGATTTATCATTAAGTTTCACAAAGCTTCAAGAGATGATGTTGTCTAAAAAAGACGAGTTTAAACATATGATACGTAATGAGTACATGACGATTGAGTTTTATGACTGGAATGGTAATACTATGTTACTAGACGCTGGTAAGATTTCAGAAAAAACAGGTGTTAAGTTACGTACAAAATCCATCATTGGTTATCATAATGAAGTGCGAGTTTATCCAGTAGATTATAACAGTGCTGAAAATGATAGACCGATACTTGCAAAAAATAAAGATATATTAATTGATACAGGTTCATTCTTAAATACAAATATAACATTTAATAGTTTTGCACAAGTACCAATTTTAATCAACAACGGTATTTTAGGACAATCGCAACAAGCCTATAGACAAAAAAATGCAGAAAGTCAATTAATCACAAGTCGTATAGATAATGTATTAAATGGTAGCGACCCAAAATCACGTTTTTATGACGCTGTAAGTGTAGCAAGTAATTTAAGTCCAACTGCTTTATTTGGTAAGTTTAATGAAGAATATAATTTCTACAAACAACAACAAGCAGAATATAAAGATTTAGCCTTACAACCACCATCAGTGACAGAGTCAGAAATGGGGAACGCTTTCCAAATCGCAAATAGCATTAACGGTTTAACGATGAAAATTAGTGTACCGTCACCTAAAGAAATTACATTTTTACAAAAATATTATATGTTGTTTGGTTTTGAAGTAAATGACTATAATACATTTATTGAACCAATTAACAGTATGACTATATGCAACTATTTAAAATGTACAGGTACGTATACAATACGTGACATCGACCCCATGTTAATGGAACAATTAAAAGCTATTTTGGAATCTGGTGTGAGATTTTGGCATAATGATGGTTCAGGTAATCCTATGTTACAAAATCCATTAAATAATAAATTTAGAAAGGAAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b2a04efc3c94c889467487e5268d3a2ff0052d4573e292577caeadef802fa5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4041
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SA4 Infecting Staphylococcus aureus Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2017-05-25 — GenBank