Protein

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Genbank accession
QNH71397.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPIWTKVAGTWKKVLDPEIKKAGAWTPVKVVSVKVGGVWQQVFAIEIVAFVAANATNVSLQSLFASGDWSNPLLKKRVVVNPGVIVGSTNPAVSALRTGTGWAGALQLDNYGEIQGAGGVPNSGAGGHAILCEAAGLTIKNFGAIRGGGGAGGKGGNGGAGVYYTTVTEGPQYNYPSGSPRYWWQTSPGSSDSVWWGGSNYVFGDINSPYTVGGITWTRGTQRDGSTSGGFQTNYFEVYRSYQQSHATSGGTGGNGGRGKGYGQTNAAGSSGSAGGTNAGTGGTGGTGGDWASGGATGATGNSGNNGGGSAGTGGGAAGKAISGSNTLINTGVVNGATS
Physico‐chemical
properties
protein length:339 AA
molecular weight: 33464,16720 Da
isoelectric point:9,51916
aromaticity:0,09145
hydropathy:-0,23953

Domains

Domains [InterPro]
DC_1762
ATT
1–180
DC_1762 DC_0422
IPR007932
RBD
48–184
IPR007932
QNH71397.1
1 339
Architecture
ATT
RBD
ATT 1-180 | RBD 181-339
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage AF3
[NCBI] 		2763529 Uroviricota > Caudoviricetes > Pootjesviridae > Innesvirus AF3 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNH71397.1 [NCBI]
Genbank nucleotide accession
MT778837.1 [NCBI]
CDS location
range 34908 -> 35927
strand -
CDS
ATGCCGATTTGGACAAAAGTCGCAGGAACTTGGAAGAAAGTTCTCGATCCTGAAATCAAGAAGGCAGGAGCATGGACTCCTGTCAAAGTGGTTTCCGTAAAGGTTGGAGGCGTCTGGCAACAGGTCTTCGCTATCGAGATCGTGGCATTCGTAGCTGCGAACGCGACTAACGTTTCTCTGCAGTCACTGTTCGCATCAGGAGACTGGTCGAACCCTCTCCTCAAGAAGAGAGTCGTTGTCAATCCAGGTGTGATCGTCGGCAGCACGAACCCCGCTGTCTCTGCTCTTCGTACTGGTACAGGTTGGGCTGGTGCTCTTCAGCTCGACAACTACGGAGAGATCCAGGGTGCTGGCGGTGTTCCGAACTCTGGTGCTGGTGGACACGCTATTCTTTGCGAAGCTGCTGGACTCACTATCAAGAACTTCGGTGCTATTCGAGGCGGAGGTGGTGCTGGCGGCAAAGGTGGTAACGGCGGTGCTGGTGTCTACTACACGACTGTTACAGAAGGTCCGCAATACAACTATCCGAGCGGCAGCCCTCGTTATTGGTGGCAGACATCTCCTGGCTCTAGTGATAGTGTCTGGTGGGGAGGTAGCAATTACGTCTTCGGCGATATCAACAGTCCGTACACGGTCGGTGGAATTACGTGGACACGCGGTACACAACGAGATGGCTCTACGAGCGGCGGCTTCCAGACCAACTACTTCGAAGTGTATCGCTCCTACCAGCAATCTCACGCTACCTCTGGCGGTACTGGTGGCAACGGCGGTCGAGGCAAGGGTTACGGTCAGACGAACGCTGCTGGATCTTCTGGATCTGCTGGTGGTACGAATGCTGGTACTGGTGGTACAGGCGGCACTGGTGGAGATTGGGCTTCCGGAGGTGCAACAGGCGCAACAGGCAATTCCGGCAACAACGGCGGTGGATCTGCTGGCACTGGTGGCGGAGCAGCCGGTAAAGCTATCTCCGGCTCGAACACTCTGATCAATACGGGTGTAGTCAACGGAGCGACTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6983868732d926600c57f7700cadf07d6d44d87fa59f71f88cfe552049b342a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8485
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegM_AF3 Gunathilake,D., Mackenzie,K.D., Yost,C.K. and Hynes,M.F. 2020-03-12 — GenBank