Protein

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Genbank accession
YP_009217228.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYTLVRARYRLDRRAGRWIEANLANELVTTLSAKYGDVYLYIEYPGTGGAVQKALHWDNVINWLNEVDTTVTVQQWLTSLGNRTLPFDATLPNEDVRLVKYAQAWHCGYNVQPVATNGHVDQQISKFEKQDLLLTHPKHAPQKIRDYSMVTVNGMFHLTDWTDAGVRVIDGNTTLRRSNDNQIGIYSFETIGKLTYIPVTDEMITSQGETAPLWDGAYLTMPAGVDLTNKTVLLVTGGYLNVLSNVYTRVAERTWRISFGKMMFLDRYIESARCMDLSSLGLTINANDPTEFVVNELKNDAVIRAYLTLSQTFFVIVDSPTFFHGYEPVEYLNLPGRFIDETYNRLPMVGAYGRMLDYHTIHEPHETYLVPDKEPMYVYCATRNVRHDYDAEHMNWTQQGIINGGRYPAHPFRDETAFFRVMGVEG
Physico‐chemical
properties
protein length:426 AA
molecular weight: 48776,63260 Da
isoelectric point:5,63055
aromaticity:0,11737
hydropathy:-0,30329

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009217228.1
1 426
Domain Start End Length (AA) Confidence
N-terminal 1 110 110 0,4514
Central domain 111 357 248 0,7174
C-terminal 358 426 68 0,6267
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-110
Central
111-357
C-terminal
358-426

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PhiPA3
[NCBI] 		998086 Uroviricota > Caudoviricetes > Chimalliviridae > Miltoncavirus PhiPA3 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009217228.1 [NCBI]
Genbank nucleotide accession
NC_028999 [NCBI]
CDS location
range 136101 -> 137381
strand -
CDS
ATGTACACTTTAGTACGTGCAAGGTATCGGCTTGATCGCCGCGCCGGACGCTGGATTGAGGCGAATCTTGCCAACGAGCTAGTGACTACTCTCTCCGCTAAATACGGTGATGTCTACCTTTATATCGAGTATCCTGGTACTGGTGGTGCGGTACAAAAGGCACTGCATTGGGATAATGTCATCAACTGGTTAAACGAGGTTGATACGACAGTCACTGTTCAGCAATGGTTGACCAGCCTTGGTAATCGAACTCTGCCATTTGATGCTACTCTACCGAACGAGGATGTTCGATTAGTGAAATATGCTCAAGCATGGCACTGCGGCTATAATGTTCAACCGGTCGCCACCAATGGGCATGTTGATCAACAGATTTCTAAATTCGAGAAGCAAGATCTACTGCTGACCCATCCCAAGCATGCTCCACAAAAGATACGTGATTACAGCATGGTGACGGTTAACGGCATGTTCCATCTGACAGATTGGACTGATGCTGGAGTTCGAGTCATTGACGGTAATACTACACTGCGCCGTTCGAACGATAACCAAATTGGAATCTATTCGTTTGAGACCATTGGTAAGCTGACATACATCCCCGTGACTGATGAAATGATCACCTCACAAGGTGAAACTGCTCCACTGTGGGATGGTGCATATCTGACAATGCCAGCTGGTGTCGATCTGACTAATAAAACAGTATTGTTGGTAACAGGCGGTTATTTAAACGTTTTGTCTAACGTGTATACCCGTGTAGCAGAACGGACATGGCGAATCAGCTTCGGTAAAATGATGTTCCTAGACCGTTATATTGAATCGGCTCGCTGTATGGATCTATCTAGTTTAGGGTTAACCATCAATGCTAATGATCCTACGGAGTTTGTAGTTAACGAACTCAAAAATGATGCCGTTATTCGAGCATACCTTACTTTATCGCAGACGTTCTTTGTTATTGTGGATAGCCCGACTTTCTTCCATGGATATGAGCCTGTCGAATATCTGAATCTACCGGGTCGGTTTATCGACGAGACATACAACCGTCTACCGATGGTTGGCGCGTACGGTCGGATGCTTGATTATCACACAATTCATGAACCCCATGAAACGTATTTGGTACCTGATAAAGAACCCATGTACGTGTACTGTGCCACCCGTAATGTTCGTCACGATTACGATGCCGAACACATGAACTGGACACAGCAAGGAATCATTAATGGTGGTCGTTATCCGGCTCATCCCTTTAGAGATGAGACTGCATTTTTCCGTGTGATGGGTGTAGAAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b165ee0fe227da5bde71d0813aa586e8bef5555d93cafb8dd156ff7ba17c9fbb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3054
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50