Protein

Genbank accession
YP_009593496.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MPVVGAAITTSFAAETSTAVGSFIINTVASMALSAVSQALRGKPRQAGIRSDVTLAGEETPGSLVFGKYATGGFMATAPMTRGSAGGMPNGFLTFVIELADMPIGGLDGIWIGDEKAEILPPVAGSLYPDHNALGGRFSGKAWFRFFNGRTTAYAGLTDHTDQPRPWQEDMIGRGLPFVVMRFRYDREVFQGLPQCLFEVTGIPLYDPRKDSTVGGSGAHRWGQLDTYEPSENPGVQVYNILRGIYYNGAHIWGGRASADDLPLNNWVAAMNACDQLVDGQPRWRASFEAKIGPEHFGGDEPAAVIEEILRGCSGSLAEFGGVYRIRIGGVGMPVMAFTDEDIIISQGQSFEPFRGLDQVYNTVQAQYPEPVAKWASKEAPRRQNAGFLAEDGDAYVASLNLPATPYPAQVQRVMRAYMMDGRRQRQHNITLPPEFAAVEVLDAVAWTSPRNGYINKVFEVTARDDNPRTLLQGFGLRERDPNDYNWTPDMALPSSAASPTTPEPAPRVVLGFDVSGVAIRDANGVQRRPAIRMTWNGDQPDARAIRFQIRPQGQTELAAEGSVHAIADGELIVSEGILANTTYQVRARLVTTRATLWTGWLSVTTPDIRLTPLDLRMDEIAAEVIADAEALEIWIKGDDPVLIGLREDVDAARADVGAARDDIAAEAARLEALAMTNLNVAKAYTDTGLVNESAARVSGDQALAAQIQTLTAALTSDNLLDNPLFGSGLDGWTASGFVTAQDRDPASSNPIFANAPTPRFVQVVPPSSGTRMLRQQFPVEFAANEVIQWRVKAGTRASGRTATVRVNWYNDTGTQIGGNVDTTLTLVVDEWRTFSGQHTPPSGAVEMRWQLVVPSGTSDPTFFADTAVTKVDQSTIARITSLEVAVANNEAAATLFRNTAESRLDANEAAITTEATTRATQDAALSSQINTVSAVANRARTFWQPTAPNNPQIGDIWYDSENNRRPRRWGGTQWNFVDDTRIAQNASAIATESIARADADSALASQINTARTFWQPTAPNNPQIGDIWYDSENNRRPRRWGGTQWNFVDDTRIAQNASAITNESHRARERR
Physico‐chemical
properties
protein length:1072 AA
molecular weight: 116539,65530 Da
isoelectric point:5,02402
aromaticity:0,08302
hydropathy:-0,31334

Domains

Domains [InterPro]
G3DSA:2.60.120.260
716–872
G3DSA:2.60.120.260
YP_009593496.1
1 1072
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Paracoccus phage Shpa
[NCBI] 		1647282 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009593496.1 [NCBI]
Genbank nucleotide accession
NC_041868.1 [NCBI]
CDS location
range 12822 -> 16040
strand +
CDS
ATGCCTGTTGTCGGCGCAGCTATTACGACCAGCTTTGCCGCTGAGACCAGCACGGCAGTCGGATCGTTCATCATCAACACCGTCGCCAGCATGGCGCTGTCGGCTGTGTCGCAGGCGCTGCGGGGCAAGCCGCGTCAGGCGGGCATTCGATCCGACGTGACGCTGGCCGGAGAGGAAACCCCCGGTTCGCTGGTCTTCGGGAAATACGCCACTGGCGGCTTCATGGCGACTGCGCCCATGACGCGCGGATCGGCGGGCGGAATGCCCAACGGTTTCCTCACCTTCGTGATTGAACTGGCGGATATGCCCATCGGCGGGCTGGATGGCATCTGGATCGGTGACGAGAAGGCCGAGATCCTGCCGCCGGTCGCTGGCAGCCTGTATCCCGATCACAACGCCCTGGGCGGGCGGTTCAGCGGCAAGGCGTGGTTCAGGTTCTTCAATGGGCGCACGACCGCTTATGCCGGGCTGACGGACCACACCGACCAGCCCCGCCCGTGGCAGGAGGACATGATCGGGCGCGGACTGCCCTTCGTCGTGATGCGGTTCCGCTATGACCGGGAGGTGTTCCAGGGCCTGCCGCAATGCCTTTTCGAGGTGACGGGCATCCCGCTTTATGACCCGCGTAAGGACAGCACGGTCGGCGGGTCCGGGGCGCATCGGTGGGGGCAGTTGGACACCTACGAGCCGAGCGAAAACCCCGGCGTGCAGGTCTATAATATCCTGCGCGGCATCTACTACAACGGCGCGCATATCTGGGGCGGTCGGGCATCGGCTGACGACCTGCCGCTGAACAACTGGGTCGCGGCGATGAACGCGTGCGACCAGTTAGTGGACGGACAGCCTCGGTGGCGGGCCAGCTTTGAGGCCAAGATCGGTCCGGAGCATTTCGGCGGCGATGAACCGGCGGCAGTGATCGAGGAAATCCTGCGCGGCTGTTCCGGTTCGCTGGCCGAGTTCGGCGGGGTCTACCGCATCCGCATCGGTGGCGTCGGGATGCCTGTCATGGCGTTCACCGACGAGGACATCATCATCAGCCAGGGTCAGTCGTTCGAGCCTTTCCGGGGTCTGGATCAGGTCTATAATACCGTGCAGGCGCAGTATCCCGAGCCTGTGGCGAAATGGGCCAGCAAGGAGGCCCCGCGCCGCCAGAACGCCGGGTTCCTGGCCGAGGATGGGGATGCCTATGTCGCCAGCCTGAACCTGCCCGCGACCCCCTATCCGGCGCAGGTGCAGCGGGTGATGCGCGCCTACATGATGGACGGGCGCCGCCAGCGGCAGCACAACATCACCTTGCCGCCCGAGTTCGCAGCGGTCGAGGTGCTGGACGCCGTGGCATGGACGAGCCCGCGCAACGGCTACATCAACAAAGTGTTCGAGGTCACGGCGCGGGACGATAACCCCCGCACGCTGCTGCAAGGCTTCGGCCTGCGTGAGCGCGACCCGAACGATTACAACTGGACGCCGGACATGGCGCTGCCGTCGAGCGCGGCCAGCCCGACGACGCCCGAGCCTGCGCCCCGCGTGGTCCTGGGTTTCGACGTGTCCGGGGTGGCGATCCGGGACGCGAACGGGGTTCAGCGGCGCCCGGCGATCCGCATGACGTGGAACGGCGACCAGCCTGACGCGCGGGCGATCCGGTTCCAGATCAGGCCGCAGGGGCAGACGGAACTGGCAGCGGAGGGTTCCGTTCACGCCATCGCGGACGGCGAATTGATCGTGTCCGAGGGCATCCTTGCCAATACGACCTATCAGGTCCGGGCGCGGCTGGTCACGACGCGGGCGACCCTCTGGACTGGCTGGCTGTCGGTCACGACCCCGGACATTCGCCTGACCCCGCTTGATCTTCGCATGGATGAAATCGCGGCTGAGGTCATCGCAGACGCCGAGGCGTTGGAAATCTGGATCAAAGGCGACGACCCGGTCCTGATCGGCCTGCGCGAGGACGTGGACGCCGCGCGGGCTGACGTGGGCGCGGCGCGCGATGACATTGCAGCCGAGGCAGCGCGCCTTGAGGCCTTGGCGATGACGAACCTCAACGTCGCCAAAGCCTACACCGACACGGGCCTCGTGAATGAGAGCGCGGCTCGGGTGTCTGGCGATCAGGCGCTTGCGGCTCAGATCCAGACGCTGACGGCTGCATTGACGAGCGACAACCTGCTGGACAACCCCTTGTTTGGCAGCGGCCTGGACGGCTGGACCGCGAGCGGCTTTGTCACGGCGCAGGATCGTGACCCTGCATCGTCCAACCCGATCTTTGCCAACGCGCCGACGCCGCGCTTTGTGCAAGTCGTTCCGCCGTCGAGCGGGACGCGGATGCTTCGCCAGCAGTTCCCGGTCGAGTTCGCGGCGAACGAGGTCATCCAGTGGCGCGTGAAGGCCGGGACGCGGGCCAGCGGGCGCACCGCGACAGTCCGCGTCAACTGGTATAACGACACCGGCACCCAGATCGGCGGGAACGTGGATACGACCTTGACGCTGGTCGTGGATGAATGGCGCACATTCTCGGGCCAGCACACGCCACCCTCTGGTGCTGTGGAAATGCGCTGGCAACTGGTCGTCCCGTCTGGCACGTCTGACCCGACGTTCTTCGCGGACACCGCTGTGACCAAGGTCGATCAATCCACCATTGCCCGGATCACCTCGCTTGAGGTGGCTGTAGCGAACAATGAGGCGGCGGCTACCCTGTTCCGCAACACGGCGGAGAGCCGCCTTGACGCCAACGAGGCAGCGATCACGACCGAGGCCACGACGCGGGCCACGCAGGACGCCGCGCTGTCGTCGCAGATCAATACCGTCTCGGCGGTGGCGAACAGGGCGCGGACCTTCTGGCAGCCGACTGCGCCTAACAACCCGCAGATTGGCGATATCTGGTATGACAGCGAGAACAACCGCCGCCCGAGGCGGTGGGGCGGCACCCAGTGGAATTTCGTCGATGACACGCGGATCGCTCAGAACGCATCCGCCATTGCGACCGAGAGCATCGCCCGCGCAGACGCCGATAGCGCGCTTGCCAGCCAGATCAATACGGCGCGGACCTTCTGGCAGCCGACTGCGCCTAACAACCCGCAGATTGGCGATATCTGGTATGACAGCGAGAACAACCGCCGCCCGAGGCGGTGGGGCGGCACCCAGTGGAATTTCGTCGATGACACGCGCATTGCCCAGAACGCATCCGCAATCACGAACGAGAGCCATCGCGCGCGCGAACGCCGATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
7dbc5a97cab84572fa69e8316713c0678fdbb69ccec4b1e283c774baf63b2d34
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7921
Evidence 0,7921
Download PDB

Literature

Title Authors Date PMID Source
Isolation and characterization of bacteriophages from East Africa Rift Valley soda lakes van Zyl,L.J., Nemavhulani,S., Cowan,D.A. and Trindade,M.I. 2016-12 — GenBank