Protein

Genbank accession
AGG54081.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MALTKINGNNIDTTTEALIKVLQLSGNGAYLKLPQYASQSAINSAIPSPAFGTIVFNNEEDAAQIYVADASQGNAGWTSVGGGGPSIGENSVIRTSQNFIESSVNIGSTSNGGVEFANAFSIGPITINSGVTVGMDNGSEWTIIGTNQYSSYRN
Physico‐chemical
properties
protein length:154 AA
molecular weight: 15916,24960 Da
isoelectric point:4,25061
aromaticity:0,07792
hydropathy:-0,09805

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SSM4
[NCBI] 		536466 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8018
[NCBI] 		166322 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG54081.1 [NCBI]
Genbank nucleotide accession
HQ316583 [NCBI]
CDS location
range 15130 -> 15594
strand +
CDS
ATGGCACTAACTAAGATCAATGGTAATAACATTGATACTACAACTGAAGCATTGATTAAGGTACTTCAGTTGAGTGGCAATGGTGCATACTTAAAGTTACCACAATACGCATCACAATCAGCAATCAACTCAGCAATTCCGTCACCTGCATTTGGTACGATTGTATTCAACAATGAAGAAGATGCAGCGCAAATATACGTTGCTGATGCTTCGCAAGGAAACGCGGGATGGACATCTGTAGGTGGTGGTGGACCTTCTATCGGTGAGAATAGTGTCATTAGAACTTCACAGAATTTTATTGAGTCAAGTGTAAATATCGGTTCAACTTCTAACGGTGGTGTTGAATTCGCTAACGCATTCAGTATTGGTCCCATTACTATTAATAGTGGTGTGACAGTAGGCATGGACAACGGTTCAGAGTGGACGATCATTGGAACCAATCAGTACAGTAGTTACAGAAATTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
49e7e57c1aba02ea09fe1109ef024a86c25ebd4d1f80de2c44fd6f2f777bda90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6059
Evidence 0,6059
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM4 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank