Protein

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Genbank accession
YP_009134011.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MPFYQETRTMKGAVIGTIMPWSGPVSNIPKGWIICDGTQPPANEYPLLVQAIGDTYNSGTTNLGGGFPAYTGNFTLPDLVGGKMLMDIEQSYFGSLTADRDNDPDAGNLISPYIGQNTDNGVNAAWNNVYTDVVFTLNERTGYSGNVRGNSIIDGEGEKSIFIGGRKLGHTHVRAHGHSGIYETVSGGLGSSGTATNRRPGLGVIPYDNITATFNYAAIDEAPTVFGSRFDDGVVDSVRLGHEGFTKGNVELAGSGNWGSFGSFSGFGSGDPGRTVMRVSGENPPINLSPQRVTQTSLAQSVNYDYPVLGGNGANSVPFASGGGNTNIPSGFTNYYEDTPAAGNYGTLLSNPGSSFVTDTGGGAQANVDAHDHEPITVLFDQNSLKPQSTLVADVNIPATTNLDNASNVAALQISMNTSQPSMTCIYIIRAY
Physico‐chemical
properties
protein length:432 AA
molecular weight: 45346,30070 Da
isoelectric point:4,63865
aromaticity:0,09028
hydropathy:-0,28727

Domains

Domains [InterPro]
IPR037053
ATT
5–79
IPR037053 DC_0344
IPR037053
ATT
5–90
IPR037053
SSF88874
STR
6–74
SSF88874
IPR011083
ATT
16–74
IPR011083
YP_009134011.1
1 432
Architecture
ATT
STR
ATT 5-90 | STR 91-432
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014j
[NCBI] 		1493514 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus tusconj
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009134011.1 [NCBI]
Genbank nucleotide accession
NC_026926.1 [NCBI]
CDS location
range 30506 -> 31804
strand +
CDS
ATGCCTTTCTATCAAGAAACAAGAACCATGAAAGGTGCCGTTATTGGCACCATCATGCCATGGTCTGGACCTGTCAGTAATATACCAAAAGGTTGGATTATTTGTGATGGAACTCAACCACCAGCAAATGAGTATCCTTTACTTGTGCAAGCAATTGGGGATACTTATAATTCTGGAACGACTAATTTAGGAGGAGGATTTCCAGCATATACTGGCAATTTTACACTACCCGATTTAGTTGGTGGTAAAATGTTGATGGACATTGAACAATCTTATTTTGGATCATTAACTGCTGACAGAGATAATGATCCTGATGCTGGTAATTTAATTTCTCCATATATTGGACAAAATACTGATAATGGAGTCAACGCTGCTTGGAATAATGTATATACTGATGTAGTTTTCACATTAAATGAGAGAACTGGATATTCTGGAAATGTTAGAGGTAATAGTATTATAGATGGTGAAGGGGAAAAATCTATATTTATTGGTGGTAGAAAATTAGGACATACTCACGTTAGAGCACATGGTCACAGTGGAATTTATGAAACTGTATCTGGAGGTCTAGGTAGTTCTGGAACAGCAACAAATCGAAGACCTGGATTAGGTGTTATACCTTATGATAATATAACGGCAACATTTAATTATGCTGCCATTGATGAAGCGCCAACAGTTTTTGGTAGTAGATTTGATGATGGTGTTGTTGACTCTGTTCGACTTGGACACGAAGGATTTACAAAAGGTAATGTTGAGTTAGCTGGATCTGGCAACTGGGGATCTTTTGGTAGTTTTAGTGGATTTGGTAGTGGAGACCCAGGAAGAACTGTTATGAGAGTTAGTGGTGAAAATCCACCTATTAACTTATCACCACAAAGAGTTACTCAAACTTCTCTTGCTCAATCTGTGAATTATGATTATCCTGTTTTAGGTGGAAATGGAGCTAATTCGGTTCCTTTTGCTTCTGGTGGTGGTAATACTAATATTCCTTCAGGATTTACTAATTATTACGAAGATACGCCAGCTGCTGGAAACTATGGCACATTACTAAGTAATCCTGGATCTAGTTTTGTTACTGATACCGGTGGTGGAGCACAAGCAAACGTTGATGCTCATGATCACGAACCAATTACAGTTTTGTTTGATCAAAATAGTTTAAAACCACAGTCCACATTGGTTGCTGATGTTAATATTCCCGCCACTACTAATCTTGATAATGCTTCAAATGTTGCAGCACTACAGATTAGTATGAACACTAGTCAACCGTCTATGACATGTATATACATCATCCGAGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
33c4d92ffa34aff31dd2b80357e5d1600c00702264f581bc0ea31a1924892f0f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3694
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank