Protein

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Genbank accession
XRA40238.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MALIKVQSEQIRTPSTVSDSPIVARQGRLVVGQPTEAVSELTEDTSYDAGAGVLSLVFTNGRTLRVEGFPTISDVPVGRQGPRGETGQDGKDGRDGNDGRPGEGGCAGVAGPEGEMGPQGPDGRPGQRGPDGNPGPTGPTGPKGPRGDTGERGETGGTGPDGAPGPTGSTGAPGPVGNLPIIVSTVQPSTAQDGWLWVNPNADTMNLWP
Physico‐chemical
properties
protein length:209 AA
molecular weight: 20979,65790 Da
isoelectric point:4,49593
aromaticity:0,02871
hydropathy:-0,67033

Domains

Domains [InterPro]
DC_1829
ATT
1–75
DC_1829 IPR008160
PTHR24637
Unmapped
52–177
PTHR24637
DC_0656
STR
123–206
DC_0656
XRA40238.1
1 209
Architecture
ATT
STR
ATT 1-75 | STR 117-206 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Sen-NF
[NCBI] 		3411927 No lineage information
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA40238.1 [NCBI]
Genbank nucleotide accession
PV359490.1 [NCBI]
CDS location
range 95488 -> 96117
strand +
CDS
ATGGCGCTTATTAAAGTTCAGTCAGAACAGATACGAACTCCCAGCACTGTTTCTGATAGCCCTATTGTCGCACGACAGGGTCGCCTTGTTGTAGGCCAACCTACAGAAGCTGTATCAGAGCTTACTGAGGATACAAGCTACGATGCAGGCGCAGGTGTTTTAAGTCTTGTATTCACTAACGGGCGTACGTTACGTGTCGAGGGATTCCCTACTATCTCTGATGTTCCTGTAGGTCGTCAAGGCCCGAGAGGGGAAACAGGACAAGACGGGAAAGACGGACGCGATGGAAATGACGGACGCCCAGGAGAGGGTGGATGTGCGGGAGTCGCTGGCCCGGAGGGTGAGATGGGGCCACAGGGGCCTGACGGAAGACCCGGACAGCGTGGGCCCGATGGTAATCCCGGCCCAACTGGCCCAACAGGCCCGAAAGGCCCAAGAGGGGATACAGGGGAACGTGGAGAAACTGGAGGCACAGGCCCGGATGGAGCACCCGGCCCGACAGGATCAACAGGAGCCCCAGGCCCAGTAGGGAATCTTCCGATCATCGTTAGCACAGTCCAGCCCTCGACAGCACAGGATGGATGGCTATGGGTAAACCCAAACGCAGACACGATGAATCTCTGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
711df76ffc7c3a472ac45013f2de40cd8903013be997a6d4ed13be1c97fcb7e0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7495
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50