Protein

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UniProt accession
A0A8S5LJ63 [UniProt]
Protein name
Collagen I alpha 1
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAGLRKVRVQLLNESTGAVEEEVNVLTSAECVTFADGETFEQKLAAGKLTGPKGATGAQGPQGIQGPKGETGERGATGAAGEAGAKGVSMRLLGEWSNSTAYVNNSAYIDIVTYSGNTYACKTSNTGQTPTNTTYWTLIAQKGATGAQGTQGPKGDTGAAGPQGATGPKGATGSQGPKGDKGDPGDTVKVGTSLSNATQKKLFFKIV
Physico‐chemical
properties
protein length:207 AA
molecular weight: 20834,82440 Da
isoelectric point:8,79834
aromaticity:0,05314
hydropathy:-0,48116

Domains

Domains [InterPro]
DC_0876
STR
9–205
DC_0876
IPR008160
STR
51–87
IPR008160 IPR036573 IPR008160
IPR050149
Unmapped
51–185
IPR050149
G3DSA:2.10.10.90
STR
55–139
G3DSA:2.10.10.90
IPR003610
CBM
93–139
IPR003610
A0A8S5LJ63
1 207
Architecture
STR
STR 9-205 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ct6F13
[NCBI] 		2827602 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD70062.1 [NCBI]
Genbank nucleotide accession
BK015859 [NCBI]
CDS location
range 32562 -> 33185
strand +
CDS
GTGGCTGGGTTAAGAAAAGTAAGAGTTCAATTATTAAATGAAAGTACAGGTGCTGTTGAAGAAGAGGTAAATGTTTTAACATCTGCAGAGTGCGTTACTTTTGCTGATGGCGAAACATTTGAACAAAAGTTAGCAGCAGGTAAATTAACAGGACCTAAAGGAGCAACTGGGGCTCAAGGGCCACAAGGAATACAAGGTCCTAAAGGCGAAACAGGAGAGAGAGGTGCAACTGGAGCAGCTGGTGAAGCAGGAGCAAAAGGTGTTTCAATGAGATTATTAGGTGAATGGTCAAATTCTACTGCTTATGTAAATAATTCAGCGTATATAGATATTGTTACATATAGTGGTAATACTTATGCTTGTAAAACTTCTAATACAGGTCAAACTCCTACAAATACAACTTACTGGACTTTAATAGCACAAAAAGGAGCAACTGGAGCACAAGGTACTCAAGGTCCCAAAGGAGATACTGGTGCAGCTGGGCCACAAGGAGCAACAGGGCCTAAGGGGGCAACAGGCTCTCAGGGACCTAAGGGAGATAAAGGAGATCCAGGAGATACAGTAAAGGTTGGAACAAGTTTAAGTAATGCTACACAGAAGAAACTTTTCTTTAAAATAGTTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030246 carbohydrate binding Molecular Function IEA:InterPro (UniProt)
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Molecular Function IEA:InterPro (UniProt)
GO:0005975 carbohydrate metabolic process Biological Process IEA:InterPro (UniProt)

Tertiary structure

PDB ID
dbb5e8bee4c902495aed1ad02b73d9cc58753d28148a8b4662c734329acf80f5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6045
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50