Protein

View in Explore
Genbank accession
QUL76917.1 [GenBank]
Protein name
hinge connector of long tail fiber proximal connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MIFYRPDITATPSSEAWVLNMYAKDGLNRGMGSLIISARTDGGNKVYLRANKDGSPNTSLTLDSQTQQVTVEQGSFRVIGTTNLGVTNAASMAVSGAVTANTVTPTNWANHDERYMTGIPRGMSGTSFGAAVVTEKNDVLSVGGNITDGPYGNTTYYGQVVNYRRTLNSGVSLVQTYFGNEMWFRLGSGSPGAWSWNQGDANGWRRVYDTVSPPTPAEVGAVNKAGDTMTGGLALLGDLTFRNLVNRHIRFEYTKNDGSTAVDAYIYKDGVDSSTRRAGLRINCATPNKASGNTLNSGDFVFGENGNFTLPGGGMIIQDGLNSGVYCISALSTLSTGTKNYLRRFRGGSGDVIFHETVQSNTWRIASGGSDSQDEMVLSTAGSGWVRYRGEVVSQSANGLRIAYNNKGFFIRNDSNTTYFLLTNDNDPYGSYNSLRPLYINNDTGSVTLGHAVGIGGNLSVNGTFTTANSSLSNGQLVLNGSGDSQVYFSRSGANPRDMRIFHSGDASRGNRVEIADSTSYLVYFERHPSSGIQLSMNGNGIFNDVYIRSDERLKSNFSKIENALDKVDLLDGMVYDKANHIGGEETTREAGLVAQQLQEVLPEAVKKGVDGEQNEILTVSSSAVIALLVNAIKELREEVRELKSR
Physico‐chemical
properties
protein length:646 AA
molecular weight: 69591,16470 Da
isoelectric point:5,91929
aromaticity:0,08514
hydropathy:-0,37430

Domains

Domains [InterPro]
DC_0000
STR
5–646
DC_0000
IPR048390
ATT
379–440
IPR048390 IPR030392 Coil
IPR030392
CHP
550–646
IPR030392
QUL76917.1
1 646
Architecture
STR
ATT
STR
STR 5-378 | ATT 379-440 | STR 441-646
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QUL76917.1
1 646
Domain Start End Length (AA) Confidence
N-terminal 1 58 58 0,0029
Central domain 59 257 200 0,2705
C-terminal 258 646 388 0,8016
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-58
Central
59-257
C-terminal
258-646

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UPEC03
[NCBI] 		2811508 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QUL76917.1 [NCBI]
Genbank nucleotide accession
MW250785 [NCBI]
CDS location
range 45088 -> 47028
strand +
CDS
ATGATTTTCTATCGTCCCGATATTACGGCAACCCCGTCATCTGAAGCATGGGTTTTAAACATGTATGCGAAAGATGGTTTGAATCGAGGCATGGGTTCGTTGATTATTTCTGCTCGTACTGACGGTGGAAATAAAGTATATCTGCGGGCGAATAAAGACGGTTCCCCTAATACAAGTTTAACGCTGGATTCGCAAACCCAACAGGTAACAGTTGAGCAAGGATCTTTTCGCGTAATCGGTACTACGAATCTTGGTGTGACGAACGCCGCATCAATGGCGGTTAGCGGTGCGGTAACTGCGAATACAGTAACCCCGACAAACTGGGCTAACCATGATGAACGATATATGACGGGCATTCCTCGCGGTATGTCTGGAACAAGTTTCGGTGCTGCTGTTGTAACTGAAAAGAACGATGTTCTGTCGGTAGGCGGTAACATCACCGACGGCCCATATGGTAACACTACGTATTACGGGCAGGTTGTCAACTATCGCCGTACATTGAATAGTGGGGTTTCATTAGTTCAAACATACTTCGGGAACGAAATGTGGTTTCGTCTTGGATCAGGTTCTCCGGGTGCGTGGTCATGGAACCAGGGCGATGCTAATGGTTGGCGGCGTGTTTATGATACGGTCAGTCCACCAACTCCGGCAGAAGTGGGGGCAGTAAACAAAGCTGGTGATACAATGACTGGTGGTTTAGCGTTACTTGGGGATTTGACCTTTCGAAATTTGGTAAATCGTCATATTCGTTTCGAATACACCAAAAACGACGGTTCTACCGCTGTTGACGCTTACATCTATAAAGATGGTGTAGATAGCTCTACTCGCCGTGCTGGACTTCGCATTAACTGTGCCACACCGAACAAAGCGAGCGGGAATACTTTAAACTCAGGTGATTTTGTATTCGGGGAGAATGGTAACTTCACACTGCCTGGCGGTGGTATGATTATTCAGGACGGCCTTAACTCTGGTGTTTATTGTATTTCTGCATTGAGTACATTATCAACAGGAACGAAGAATTACCTTCGTCGTTTCCGTGGTGGTTCTGGTGATGTGATTTTTCATGAAACCGTACAAAGTAATACATGGCGTATAGCGTCGGGTGGTTCTGATTCACAAGATGAAATGGTTCTTTCTACTGCTGGTTCTGGTTGGGTTCGATATCGTGGAGAGGTTGTTTCGCAATCAGCTAACGGGTTGCGGATTGCGTATAACAATAAAGGATTCTTTATCCGAAATGACTCAAACACCACATATTTCTTGTTGACTAATGATAATGATCCCTATGGCTCGTACAACAGTCTTCGCCCTTTGTATATCAACAATGATACTGGTTCTGTAACGTTAGGTCATGCTGTTGGAATAGGCGGAAACCTCAGCGTCAACGGTACATTTACCACAGCAAACAGCAGTTTGAGCAATGGTCAATTAGTATTAAACGGTTCAGGCGATTCGCAAGTTTATTTTTCACGAAGTGGTGCTAACCCTCGCGATATGAGAATTTTCCATTCTGGTGATGCTTCTCGCGGGAACCGTGTTGAAATTGCTGATTCTACATCATATCTGGTTTATTTTGAGCGTCATCCGTCAAGTGGCATTCAGTTGTCCATGAACGGTAACGGTATCTTTAACGATGTGTATATTCGTTCTGATGAAAGACTGAAAAGTAATTTCAGTAAGATTGAAAATGCATTGGATAAAGTTGATTTGCTTGATGGTATGGTGTACGACAAAGCAAACCATATCGGGGGTGAAGAAACTACCCGCGAGGCTGGTTTAGTCGCACAACAACTGCAAGAAGTATTACCGGAAGCCGTTAAGAAAGGTGTTGATGGTGAACAGAACGAGATCTTAACTGTTTCGTCTTCTGCTGTTATTGCGTTGCTGGTTAACGCGATTAAAGAACTCCGTGAGGAAGTCAGGGAACTTAAATCCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08aa6dd3cd85345d920463dc5479b14f1a364dc10b1ee9a6509f356b282338ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6826
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of avian pathogenic Escherichia coli bacteriophages UPEC01, UPEC03, UPEC06 and UPEC07 Kazibwe,G., Hinkley,T.C., Le Ny,A.-L.M. and Nakavuma,J.L. 2022-03-17 — GenBank