Protein

View in Explore
Genbank accession
AIX22799.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MALTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSLQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGEVLYTNVAPIDENSNLDITSPNNVLYKYNSVEGGIIVPRGCSLVGTDLRRTKIIPKYVPYPTTYTAKGINTEADVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSTELISPKFSHHRLTCFQFADGLNSLQTLIDSGTVPVGNYGVVDDIYERTDLEIYYQKVSKAFATIPDTSGDPTTDQIQARVEENRIVGPISDEYRVLQITRNGNTATAVTVDEFDNPRDHGFSVGVNINISGVTGSTGPQSEVDATEYNGSFTVTSASGNVFTYQMSATPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMRADGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATEGDGAHLDGFAEYRKGWAHEHITATNDSFIQAVSVFAVGYGTHFTTESGADMSITNSNSNFGNTALRSAGFKAKSFSKDKAGEITHIIPPRSLNVISTSATGTSGTNTVTLADDGSVEGIIEGMLINNEDIPLGTQVSAVNTSTRVITMTSSSTDTVTGNIIFGEEVTVNWVNLDIQRTISINSELAQAGQTPGSRLYLFGYTAEPSPPATKVQGYGIGARQDGTGANAVADKINVLLYANSSATQPSVVSANVAPYGPSVSGLSAGVDGSPFQYDSSTYTIGGTSKIGGWYLSTEGGSSNTIYTALSSQSASSQRYENAAFTPTTFIKRIPDSRDLQDRTYRVRYVIDKNKTNPLPRDPLSGYVMQPLNSDATSYNLNRTFYIYDIEIVQEYERGVADGIYYLTLLCASISPSTSNFDNRKFSQNVNEVYPTFDRDNPLGDPDPSVSVADNETIGLVYSTDGATPPNKDPKLSITKEGIEFLLGDTGWVQPGTSPNWDSVNKRLSGVQLTSRYGDEEVRKIPVRENVDGTVAPVPVELRRHSIMRSGNHTFEYLGFGPGNYSTAFPQTQVETLSTDQIKFSQSIKEEAGVAFYSGLNSNGDLFIGNQIINPVTGQITSEDIAQLNVIGEEGTTIETFSEVVLTDKLTVIGGASNQLESIFSGPVTFQNTTTFTGNLQTSKFTLFNTDGTVVRQQLLAPSTTGAGGSNAQPDFATIVGYDTPSTGDLVYNSNWTPGTSLGWIYDGDTASWKQFGLTNTGDIEIQTFNTRQNIGIGEAPDSTYRVRMNGSARIDGDLVVTGRGGVGSDKYVTRTYTGDGVTQTFALTTYANVSHTANSLLVFVNGVAQIGGTNFSVDGTGANIVFSAGDEPTSIDTVHIIELPI
Physico‐chemical
properties
protein length:1330 AA
molecular weight: 143318,36720 Da
isoelectric point:4,66923
aromaticity:0,09474
hydropathy:-0,28955

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIX22799.1
1 1330
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,9727
Central domain 91 308 219 0,9586
C-terminal 309 1330 1021 0,1309
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-308
C-terminal
309-1330

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-MbCM6
[NCBI] 		3126011 Uroviricota > Caudoviricetes > Pantevenvirales > Namakavirus > Namakavirus smbcm6
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX22799.1 [NCBI]
Genbank nucleotide accession
KJ019064.1 [NCBI]
CDS location
range 24983 -> 28975
strand +
CDS
ATGGCATTAACACGTCTTAAGAATATTATTACGTCCCGTACGGGGCGTATTATTTACGTTAACCCTGATGATTTCGACGCTTCGGATGCCATTGATAACCGAGGAAACTCTGCACTTAGACCTTTTAAAAGTCTACAGAGAGCATTTCTTGAGGTAGCGAGATTCTCATATCGAGTTGGTTTATCAAATGACGAATTTGATGCCTTCTCGATTATGCTGTATCCAGCAGAATATGTTGTTGATAATAGACCAGGTGAAGTATTATATACTAATGTTGCTCCCATTGACGAGAATTCAAACTTAGATATTACTTCTCCAAACAACGTATTATATAAGTATAATTCTGTTGAAGGTGGTATTATTGTACCTAGAGGTTGCTCTTTAGTTGGCACAGATCTTAGACGCACTAAGATTATTCCTAAGTATGTGCCGTATCCAACCACATATACTGCAAAAGGAATCAATACTGAAGCAGATGTACCACCTCGCACTGCTATCTTTAAGGTAACTGGTGGCACATATTTCTGGCAATTCTCTTTCTTTGATGGTGCTGAAGAAGGTGTATACTTCAAACCTGACAGCACAGAATTAATCTCACCTAAATTCTCTCACCATAGACTCACTTGTTTCCAATTTGCTGATGGTTTGAATAGTCTACAGACATTAATTGACTCAGGCACTGTGCCTGTAGGAAACTATGGTGTGGTTGATGACATTTATGAGCGCACAGATTTAGAAATTTACTATCAAAAAGTATCTAAGGCATTTGCTACTATTCCTGATACATCTGGTGATCCTACAACTGACCAAATTCAGGCAAGAGTAGAAGAAAACAGAATCGTTGGTCCTATTTCTGATGAATATCGAGTCTTACAAATCACTCGTAATGGTAATACTGCAACAGCAGTCACTGTTGATGAATTTGATAACCCAAGAGATCATGGATTCTCTGTAGGTGTTAACATTAATATCAGTGGTGTTACAGGATCTACAGGTCCACAGTCTGAAGTTGACGCAACAGAATATAATGGATCATTTACTGTAACCTCGGCATCAGGTAATGTCTTTACCTATCAGATGTCAGCAACACCAACAGGTAATGCAGTTGGATCAAACATTACTGTTAAGACTGAGATTGATACTGTTGACTCTGCATCACCATATGCGTTTAACCTGTCACTGAGATCAGTGTGGGGTATGAATGGTATGAGAGCGGATGGTAGTAAAGCAACTGGATTTAAGTCCATGGTTGTTGCTCAATTTACTGGTTTGAGTCTTCAAAAGGATGATAGAGCATTCGTAAGATATAATGCTTCTACTGGCAATTATGATGTTGCAACTGAAGGAGATGGTGCTCACCTAGATGGTTTTGCTGAATACCGTAAGGGTTGGGCACATGAGCATATTACTGCAACAAATGATTCATTTATTCAGGCAGTTTCGGTGTTTGCTGTTGGATATGGCACACACTTTACTACTGAGAGTGGTGCTGACATGTCTATCACCAACTCAAACTCTAACTTCGGTAACACTGCTTTAAGATCTGCTGGTTTCAAAGCAAAATCATTCTCGAAGGATAAAGCGGGTGAAATTACACATATCATTCCACCTAGATCTTTGAATGTTATTTCAACATCAGCAACTGGCACATCTGGCACTAATACAGTTACATTAGCAGATGATGGATCTGTTGAGGGTATTATCGAAGGTATGCTTATCAATAATGAGGATATTCCTCTTGGCACTCAAGTATCTGCTGTTAATACTAGCACCAGAGTAATTACAATGACTTCAAGTAGCACTGATACTGTTACTGGAAATATTATTTTTGGTGAGGAAGTCACTGTAAACTGGGTAAACCTTGATATTCAACGCACAATCAGTATCAATAGTGAATTAGCACAGGCAGGTCAAACACCTGGATCCAGACTTTATCTGTTTGGATATACTGCAGAACCTTCTCCCCCTGCAACAAAGGTTCAGGGTTACGGAATTGGTGCCAGACAAGATGGCACGGGTGCTAATGCTGTAGCAGATAAAATCAATGTGCTACTATATGCTAATTCTAGTGCAACTCAACCTTCAGTTGTTTCTGCTAACGTAGCACCGTATGGTCCTAGTGTATCTGGTTTATCTGCTGGTGTTGACGGATCACCCTTCCAATATGATTCATCAACATATACTATTGGCGGCACTTCTAAAATTGGTGGTTGGTATCTCTCTACAGAAGGTGGATCTAGTAATACAATTTACACTGCATTATCTTCTCAAAGTGCAAGTAGTCAAAGATATGAGAATGCTGCTTTCACACCGACAACATTTATTAAACGTATTCCTGACAGTAGAGACCTACAAGATAGGACATATCGTGTTCGTTATGTAATTGATAAGAATAAAACTAATCCACTTCCTCGTGATCCACTGTCTGGTTATGTAATGCAACCACTTAATAGTGATGCAACCAGTTATAACCTTAACAGGACATTCTACATTTACGATATTGAAATTGTCCAAGAATATGAGCGAGGCGTTGCTGATGGAATTTACTACCTTACACTCCTTTGTGCATCTATTTCACCTTCAACTTCTAATTTCGACAACAGAAAATTCAGTCAAAACGTCAACGAAGTCTATCCTACATTTGACAGAGACAACCCTCTTGGTGACCCTGATCCTTCGGTATCCGTCGCTGACAATGAAACTATTGGTCTAGTATATTCTACCGATGGTGCAACACCACCTAACAAAGATCCCAAACTTTCTATTACTAAAGAAGGGATTGAATTCTTATTGGGTGATACTGGTTGGGTGCAACCTGGCACATCTCCAAACTGGGATTCTGTTAATAAAAGGTTGAGTGGTGTGCAACTAACTTCTAGATATGGTGATGAAGAAGTCAGAAAGATTCCTGTCAGAGAAAATGTTGATGGCACTGTTGCACCTGTCCCTGTTGAGTTACGCAGACACTCAATTATGAGATCTGGTAACCATACCTTTGAGTATCTTGGATTCGGTCCTGGTAACTACTCAACTGCATTCCCTCAGACTCAAGTAGAGACGCTATCTACAGACCAGATTAAGTTCTCTCAGTCTATTAAAGAAGAAGCAGGAGTTGCATTCTATTCGGGTCTTAACTCTAATGGTGACCTATTCATTGGTAACCAGATTATTAACCCTGTTACAGGTCAAATTACATCTGAAGATATTGCACAACTGAATGTTATTGGTGAAGAAGGCACAACGATTGAAACATTCTCTGAAGTTGTATTGACTGATAAACTCACTGTTATTGGTGGTGCATCTAACCAGTTAGAATCTATTTTCTCTGGTCCTGTTACCTTCCAAAATACAACTACATTTACAGGTAACTTGCAAACTAGTAAGTTTACTTTATTCAATACAGATGGCACTGTTGTTAGACAACAACTCTTAGCACCTTCTACAACAGGAGCAGGTGGATCTAATGCACAACCAGATTTTGCAACTATCGTTGGATATGACACACCATCTACAGGTGACTTAGTTTATAATAGTAATTGGACACCTGGCACATCTCTTGGTTGGATTTATGATGGTGATACTGCATCTTGGAAGCAGTTTGGTCTAACTAACACGGGTGATATTGAAATTCAAACATTCAATACTCGTCAAAATATTGGTATTGGTGAAGCACCAGATTCAACATATCGTGTTAGAATGAATGGTAGCGCCAGAATTGACGGTGACTTGGTTGTTACTGGTCGTGGTGGTGTTGGATCTGATAAATATGTCACTCGCACATATACTGGCGATGGTGTAACACAAACTTTTGCACTTACCACTTATGCAAATGTTTCGCATACTGCAAACTCTTTGTTAGTATTTGTAAACGGTGTTGCACAGATTGGTGGCACTAACTTTAGTGTAGATGGCACAGGTGCAAATATTGTATTTTCAGCAGGTGACGAACCTACTTCGATTGATACAGTTCATATTATCGAGTTGCCCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1e99f8a86ebe78f1b227c423d4b4a0d80481018294381c7b6757c01388013b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3601
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank