Protein

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Genbank accession
ADP02270.1 [GenBank]
Protein name
gp23
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAGNLINITDAGRAALVAAGNTGTVARRVTEVGLGTAAFTFDKGMKTMPAERKRVTTFGGENVAPDTVHVVIQDDTDDQYSLFAYGLYLDNGVLFGVYVQDTPILEKSPAAMMLLASDIVFKSIDASQLQFGPATFLNPPATMDRKGVVELATTEEVAAGTDATRAVTPATLKPRLDAKANLSGADFTGRISTRDVLHLASAPGGTGAILGAGNGDGASASTTNVALRSWYGIGFAPTIDGMPVPRTEFSHWFDTRTGNTGFRGTLDVGGLITAQTPPSGDASKRVPTTEWVVAAIASAGIGTIVFEPRTSVRAGFLKLNGALVNRSDYPALWAYAQASGALVAESAWGQNNWGCFSTGDGATTFRLPELRGEFLRCWDDGRGADSARGIGTFQSFQNAWHAHGASSAAVGDHTHGAWTDAQGWHGHHGWTGGGGGHNHNNGIFSRLLRPPYGGSLTGSDQAGSGSEQAVGAGDSADIAWSGDHAHEFNTEGSGTHSHNVGIGGAGAHAHAITVNGDGGNEARPRNIAMLAMIRAY
Physico‐chemical
properties
protein length:536 AA
molecular weight: 55606,85380 Da
isoelectric point:5,80664
aromaticity:0,08022
hydropathy:-0,18041

Domains

Domains [InterPro]
DC_0350
STR
6–536
DC_0350
IPR005601
STR
194–284
IPR005601 SSF88874
IPR037053
ATT
298–377
IPR037053
ADP02270.1
1 536
Architecture
STR
ATT
STR
STR 6-297 | ATT 298-377 | STR 378-536
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage KS5
[NCBI] 		910473 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADP02270.1 [NCBI]
Genbank nucleotide accession
GU911303 [NCBI]
CDS location
range 18937 -> 20547
strand -
CDS
ATGGCTGGAAACCTCATCAACATTACCGACGCCGGACGCGCGGCGCTCGTCGCAGCTGGCAATACCGGCACGGTTGCCCGCCGCGTGACCGAAGTCGGTCTCGGCACCGCGGCATTCACCTTCGACAAGGGCATGAAAACCATGCCCGCCGAGCGCAAACGCGTGACCACGTTCGGCGGCGAAAACGTCGCGCCCGATACAGTGCATGTCGTCATCCAGGACGACACCGACGATCAGTATTCGCTGTTCGCGTACGGTCTGTACCTCGACAACGGTGTGCTCTTCGGCGTCTACGTTCAGGACACGCCCATTCTGGAAAAGTCTCCGGCGGCGATGATGCTGCTTGCGAGCGACATCGTATTCAAGTCGATCGACGCATCGCAGCTCCAGTTCGGCCCCGCCACGTTCCTGAACCCACCGGCGACGATGGACCGCAAGGGCGTCGTCGAGCTCGCGACGACGGAAGAGGTCGCCGCAGGCACTGACGCGACGCGCGCCGTGACGCCGGCTACGCTCAAGCCACGGCTCGACGCGAAGGCCAATCTTTCCGGCGCTGACTTCACGGGCCGCATCAGCACGCGGGACGTCCTGCATCTCGCGTCGGCGCCTGGCGGCACCGGCGCGATTCTCGGCGCCGGCAACGGCGATGGCGCATCCGCCTCGACGACCAACGTCGCGTTGCGTTCGTGGTATGGCATCGGGTTCGCGCCAACGATCGACGGCATGCCCGTACCGCGAACAGAGTTTTCTCACTGGTTCGATACGCGCACCGGCAATACCGGCTTTCGCGGCACGCTCGACGTCGGCGGCCTCATCACGGCTCAAACGCCTCCATCGGGCGACGCATCGAAGCGCGTGCCAACGACCGAATGGGTTGTCGCAGCGATCGCGTCGGCCGGCATCGGCACGATCGTGTTCGAGCCGCGCACCAGCGTGCGCGCCGGCTTTCTGAAATTGAACGGCGCGCTCGTCAACCGCAGCGACTATCCCGCGCTGTGGGCGTACGCACAGGCGAGCGGCGCGCTCGTCGCCGAGTCGGCGTGGGGGCAGAACAATTGGGGATGTTTCTCGACGGGCGACGGCGCGACGACGTTCCGTCTGCCGGAGCTGCGCGGCGAATTCTTGCGCTGCTGGGACGACGGCCGCGGCGCGGATTCTGCGCGCGGGATTGGCACTTTCCAGAGCTTCCAGAACGCATGGCATGCGCACGGGGCATCGTCGGCAGCCGTCGGCGACCATACGCACGGCGCCTGGACGGACGCGCAAGGCTGGCATGGTCACCACGGCTGGACCGGCGGCGGCGGCGGACACAATCACAACAACGGGATTTTCAGCCGCTTACTGCGGCCGCCTTACGGTGGGTCGCTAACCGGTTCCGACCAGGCCGGTAGCGGCTCCGAGCAGGCGGTCGGTGCAGGCGATTCGGCCGACATCGCATGGTCCGGCGATCACGCACACGAGTTCAATACCGAAGGGTCCGGAACGCACAGCCATAACGTCGGAATCGGCGGCGCCGGCGCACACGCGCATGCCATTACCGTGAACGGGGACGGCGGCAACGAGGCCCGTCCCCGGAACATCGCCATGCTCGCCATGATTCGCGCTTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb0056a611e715d18310c1ad4cc238fcc829bd3c74248cbcf08fdc5edda49653
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7815
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis and relatedness of P2-like phages of the Burkholderia cepacia complex Lynch,K.H., Stothard,P. and Dennis,J.J. 2010 20973964 GenBank