Protein

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UniProt accession
E3SMS9 [UniProt]
Protein name
Virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
TSP
Evidence RBPdetect2
Probability 0,54
Protein sequence
MSTLSVNNLQGLSPTNKVTVPAGHKLSCESGRYRLPNYAQGSRPSNAETGELIINTTTATLEMWTGDRWAICGGGNRGATQSNPAESAGDAYDQGNQVSGTVWVSIPGSGAYQFEYDATDRYGTGDFGWIKYDAAFFGANNASIAYTVYGSPSSIIPAFNTNSSSSTSNDTINQGTHRVGREQSHQGGNSLSTIRCALPKLTKCKYDAFRTAGGSQTADFGAFTQNFSGIVNNSPYQNNGAGYWTVVFSGNSSGSFGSDMLILDQGNLRSGNGSYTVNTGVLSFGSERGSGTQVPQVIWGTTDAYNEYCYTTSWSLWLH
Physico‐chemical
properties
protein length:319 AA
molecular weight: 33944,45210 Da
isoelectric point:5,53830
aromaticity:0,11285
hydropathy:-0,46489

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
E3SMS9
1 319
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,0248
Central domain 200 308 110 0,1424
C-terminal 309 319 10 0,9791
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-308
C-terminal
309-319

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HM1
[NCBI] 		445700 Uroviricota > Caudoviricetes > Eurybiavirus >
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
5d429bcb67d1536556c56784bd8cdecaa9c7021775a282c8866401a5b16f08a8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50