Protein

View in Explore
Genbank accession
YP_009291164.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPNIMKPTGINAIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGVIYKCLRTHSDKIPTDPLNITAGYWRVAFEDAGEAAKVQANLDKHVTNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMKHGNGSNVFSVATATQPTHAIPLSQLATLVPPATETVSGVMSIATTIETEAGTNDAKAVSPLKAAQVYLKKKDNLSGLSNVTAARANLGLSDTATMPSATFLKAANNLSDVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARVNLGLTGMATTDPAAVMMKADNLAGLANTATARSNLGLGTASTRNTGDFLSSVANLSDLTNVQAARNNLGLKGAATLDVWGLPANTTAMDFQSNQSDISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWSNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 53087,02000 Da
isoelectric point:7,72939
aromaticity:0,07214
hydropathy:-0,19900

Domains

Domains [InterPro]
DC_0043
STR
1–331
DC_0043 G3DSA:2.60.40.3940
DC_0362
RBD
321–499
DC_0362
IPR054075
RBD
416–495
IPR054075
YP_009291164.1
1 499
Architecture
STR
RBD
STR 1-331 | RBD 332-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phiMK
[NCBI] 		1815957 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus MK
Host Pseudomonas aeruginosa PAO
[NCBI] 		1820602 Chordata > Actinopteri > Tetraodontiformes > Tetraodontidae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009291164.1 [NCBI]
Genbank nucleotide accession
NC_031110.1 [NCBI]
CDS location
range 44213 -> 45712
strand -
CDS
ATGCCAAACATTATGAAGCCTACGGGTATTAACGCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGTGCTGTAAAAGTTGGGCTTGGATGGGTGACAGAACTACCTCCCTACCAAACTGCCAACTTTATCGAGTACAAACAAGACCTGTTTAACGCTCACGTTAACCAACATGGTATTCCAGAGTGGGACAGCGTTACAGAGTATCAGGGCAATCTGAGCTATACTCAGGGCGCTAACGGAGTTATCTATAAGTGCCTTAGGACTCACTCTGATAAGATTCCAACTGACCCTCTGAACATTACAGCCGGATATTGGAGAGTGGCGTTTGAGGATGCAGGGGAAGCGGCCAAGGTTCAAGCCAACCTAGACAAACACGTAACCAACTACAACACCCTCTCTGGGATTGGCAACGTAGTTATTGCAAGACAAAACCTAAGTGTGTATAGTAAAGCTGAAGGCGATGCCCGGTACGCTATGAAGCACGGGAACGGCTCTAATGTCTTCAGCGTTGCCACTGCCACACAGCCAACTCACGCTATTCCTTTGAGCCAATTGGCCACTCTCGTCCCTCCGGCTACAGAGACCGTTAGTGGCGTCATGTCGATTGCAACGACAATCGAGACAGAGGCCGGCACTAATGACGCTAAAGCTGTCAGCCCTCTGAAAGCCGCTCAAGTGTATCTGAAAAAGAAAGATAACCTATCCGGGCTGTCTAACGTAACTGCGGCTAGAGCTAACCTAGGCCTATCTGACACCGCTACAATGCCTTCGGCTACGTTCCTGAAGGCTGCCAATAACCTGTCTGATGTTCCTAACAAGGCATTGGCTAGGTCTAATCTTGGAATTACAAGTAGTGCTACCCAGCCGGAAACCTATTTCTTGAGGAGCGCTCAGAACCTAGCAGATGTACCTAACAAGGCACAAGCTAGAGTCAACCTAGGCCTCACTGGGATGGCTACAACAGACCCTGCGGCGGTTATGATGAAGGCAGACAACCTTGCTGGATTGGCTAACACTGCTACCGCTCGGTCCAACCTAGGGCTAGGCACAGCTTCTACTAGAAATACAGGAGACTTCCTGTCGTCTGTGGCTAACCTGTCCGACCTCACGAACGTCCAAGCAGCTAGAAACAACCTAGGGTTGAAGGGAGCGGCTACGCTCGATGTATGGGGTCTTCCTGCGAATACAACTGCTATGGACTTCCAGTCTAATCAGTCGGATATTTCCAGAGGATGGGCTCGACTACCAAACGGCCTTCTGCTACAATGGGGAACTGGTCCCGGTCTGTCTGATGACACAAGGACGAATATCCAACTCCCTGTTCCAGCACGAATCTTGAACGTTCAAGTGACCGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGAGCAACACCGGGTTTAGAGTTAGCTGCAACTGGGGCAACTGGTCTTACCCGTTCAACTGGTTTGCTATCACTTCCACCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7153624456f2615d232985ce0503158c1a4b0b32ee532069ff4970f37a9122db
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7544
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of phiMK: A new Felix01like virus infecting Pseudomonas aeruginosa Magill,D.J., Krylov,V.N., Shaburova,O.V., Pleteneva,E.A., McGrath,J.W., Quinn,J.P. and Kulakov,L.A. 2015-03-31 — GenBank