Protein

View in Explore
Genbank accession
YAA52985.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARHFGVKQSEVVYFSVGAVLSGYKVIYDKGTQRAYSLPANIGSGVTAISLSPAGVLVHSAGSVDLGALAVAREEYVTLPGSFDTGVTVNTKNELVVFTDGKYRWDGVLPKEVPADSTPETSGGVGLGAWVSVGDAVLRGQISDPEGATKYPELQMARWRDNGDPRGWGAVGDGVADDTLAVQACFDAATGDIDLGGKTYLVRKNPALASTYPTEPDFSDGTRNYSPCLALVNKEGIRISNGTIIVNTHGLDGLALVNCRNVTVSLTVRGPNKFPAIDVPTGYAEKGEARFGYDTALFTGPNNSVDSSAYTSGAYAGVAGQFPNYDDAGNQLDGWRSTWGTFLGGYIGSWANGIKVQRGCRGILILNSHVSGFNFGGIGIGIRNIATTYGSTDYTNDTDVPDGVMVMGCTIKDCYSAGIYVLSGYRLNYESNDIQNIGHPYGDDVLNDSYDPGYGISHARNRRIRNVVVAKNQIKNCRHKCIDFHGGGQVIITENMCLEHGVVGIYAKCGAGWNPNYEPYNLIVSNNYVRSRDIPASATSGLLIGGKYTRSIDVGGGGEATAATYPNPFVKIHNNYCELRAFDGVAISTGAGDSSYQVYQDIDISHNTVVLKCQTVNNTTEAIIVNAGASASQVYRGQTVKLIGNSVKQYNSLDLSYRAVGYKVQGIPKSLIAHANTLDMNVRVQEAKLCDFVLNDQTNFSFRGNQVVSTGQRSTCTLQECMFYENTKIFRAAGSGSLSIPGTLGRGVWQLVIAGTGNAYGTKQTQFASTGSGGTGADIVKNPTTGFIADFAIGVSGLTVPAVTLDSTVQIQLKQLTQLDYVF
Physico‐chemical
properties
protein length:844 AA
molecular weight: 89683,28190 Da
isoelectric point:6,09834
aromaticity:0,09005
hydropathy:-0,14846

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–96
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR011050
DC_1596
STR
1–311
DC_1596 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR040775
RBD
91–156
IPR040775 IPR012334
IPR006626
Unmapped
255–279
IPR006626 DC_0622
YAA52985.1
1 844
Architecture
ATT
STR
RBD
ATT 1-165 | STR 166-640 | RBD 641-844
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAA52985.1
1 844
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9907
Central domain 199 728 531 0,9932
C-terminal 729 844 115 0,9686
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-728
C-terminal
729-844

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Alt63
[NCBI] 		3446675 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAA52985.1 [NCBI]
Genbank nucleotide accession
PV805631 [NCBI]
CDS location
range 60580 -> 63114
strand -
CDS
ATGAACGAAATGTTCTCACAAGGCGGTAAGGGTTCAACAGGAATCCTAACCAATAAACAAGCAATAGCACGTCACTTTGGGGTTAAACAATCTGAGGTTGTTTACTTCTCAGTGGGTGCTGTACTAAGTGGTTACAAAGTCATCTACGACAAAGGGACACAGCGTGCTTATTCCTTACCTGCTAACATTGGTTCAGGTGTTACTGCTATAAGCCTTAGTCCTGCTGGTGTATTAGTTCACTCTGCTGGTAGTGTGGACTTAGGTGCACTGGCTGTTGCTCGTGAAGAGTATGTAACCTTACCTGGTTCATTTGATACTGGTGTAACAGTTAATACCAAGAATGAACTGGTTGTCTTTACCGATGGTAAGTATCGATGGGATGGTGTATTGCCTAAAGAGGTTCCTGCTGATTCAACCCCCGAAACTTCTGGTGGCGTTGGTCTGGGTGCTTGGGTGAGTGTTGGGGATGCGGTACTACGAGGACAGATTTCAGACCCTGAAGGTGCAACAAAATACCCCGAACTACAAATGGCTCGCTGGCGTGATAATGGCGATCCACGTGGATGGGGGGCGGTTGGTGATGGCGTTGCCGACGATACGTTGGCAGTGCAGGCATGTTTCGACGCCGCTACTGGCGACATAGATTTAGGTGGAAAGACATATTTAGTTCGAAAAAATCCTGCATTGGCTTCTACGTACCCTACTGAGCCTGACTTCAGCGACGGTACACGTAACTACAGTCCGTGTCTGGCACTGGTAAATAAGGAAGGTATTCGTATCTCCAACGGCACTATAATTGTGAATACGCATGGGCTGGACGGACTTGCCCTTGTAAATTGCCGGAACGTGACTGTATCGCTGACTGTGCGTGGCCCTAACAAGTTCCCTGCTATAGATGTGCCTACTGGTTATGCAGAGAAAGGTGAGGCTCGTTTCGGATACGATACAGCACTGTTTACAGGTCCTAATAACTCCGTTGACTCCAGTGCGTACACGTCTGGTGCTTATGCTGGTGTAGCTGGACAGTTCCCTAACTATGATGACGCGGGTAATCAGTTGGATGGGTGGCGCAGTACCTGGGGGACTTTCCTTGGCGGTTACATCGGAAGCTGGGCTAATGGTATCAAGGTGCAACGCGGCTGCCGTGGCATCCTTATTCTGAACTCGCACGTATCCGGTTTTAACTTTGGTGGCATTGGTATAGGCATCCGTAACATTGCGACTACCTACGGCAGCACGGATTATACGAATGACACGGATGTACCTGACGGTGTTATGGTTATGGGCTGTACCATCAAGGATTGCTACAGTGCAGGTATCTACGTACTGTCCGGCTACAGACTAAACTATGAGTCCAACGATATCCAGAATATTGGACACCCTTACGGTGATGATGTTCTGAACGATAGCTACGACCCTGGGTACGGTATTTCGCATGCGCGTAACCGAAGAATCAGGAACGTAGTTGTTGCTAAAAACCAGATTAAGAACTGTCGTCATAAGTGTATTGACTTCCACGGTGGTGGGCAGGTAATCATCACGGAGAACATGTGCCTTGAGCACGGCGTAGTTGGTATATATGCTAAATGTGGGGCAGGTTGGAATCCAAACTACGAACCATACAACCTCATCGTTAGCAACAACTATGTGCGCTCCAGAGATATTCCTGCTAGTGCTACTTCCGGACTGCTTATAGGTGGAAAGTATACTCGCAGCATCGATGTAGGTGGCGGCGGGGAGGCTACGGCAGCGACGTATCCGAACCCCTTTGTTAAGATTCACAACAACTATTGCGAGCTTAGAGCTTTTGATGGGGTAGCTATATCGACCGGAGCAGGGGATAGCTCATACCAGGTGTACCAGGATATCGATATCAGTCACAATACGGTTGTACTTAAGTGTCAGACTGTCAATAACACAACCGAGGCTATTATAGTTAACGCTGGGGCTAGCGCATCCCAGGTATATCGGGGACAGACGGTTAAGCTGATTGGCAACTCCGTGAAGCAGTACAACTCTCTGGATTTAAGTTATCGTGCTGTTGGATATAAGGTGCAAGGTATTCCTAAGTCCCTGATTGCTCATGCCAACACTCTGGATATGAACGTGCGGGTGCAAGAGGCTAAGCTGTGTGACTTCGTTCTGAATGACCAGACTAACTTTAGCTTCCGGGGTAATCAGGTTGTGAGTACCGGGCAGAGAAGTACCTGCACGTTGCAAGAGTGTATGTTCTATGAGAATACCAAGATATTTCGGGCTGCTGGTTCAGGTAGCTTGAGTATTCCAGGTACGCTCGGCAGGGGTGTATGGCAACTAGTTATTGCGGGTACAGGGAATGCTTATGGTACTAAGCAGACTCAGTTTGCAAGTACAGGTTCTGGGGGTACTGGGGCGGATATAGTAAAGAATCCTACTACCGGGTTCATTGCGGACTTTGCAATCGGTGTTTCTGGCTTAACTGTTCCGGCAGTAACTCTGGATAGTACCGTGCAGATTCAGTTGAAGCAGCTTACGCAACTGGATTATGTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1119b4800f9b0d3eeb91ac1fa2a13b92a95f7c17b95350e15001e4f057b78e6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7973
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50