Protein

View in Explore
Genbank accession
AUR84607.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSSNLIKQPYEMILDPTGGGGRAKPVANGKFYVGEIDKDPIANPRTDIAYKDESGQERPLTSPLTLNNSGAFVVSKNDGTIIQPYMKNAVGFSVLIQDARGRDVYSGLNTGDPGNLESAIVEFLPDYTDIVYKASGGNSAFDNMIAEFPIAIEINQKCQCENGTVFLKVSETGTDKDFEPVGAINLCDFGLKGDYQLFDRTVNPSATDNKNNIQVAFDFAIDDRYSRGDSKFYKPYKYLLPFSYGGYGFSGGVILPENCDIDFGGNDIHAIGNPNNVFELNLRTERAGRPAGYYYRSHTQNFKFYNFFVGSTRTFGDKEPTPDFGHMINIEGGWIIRSGFYDIGCRPGASLKSIINLDLTHPDPDNYEVGVPDEVDMHRISAQYAQNASYTITINGDGKYGIGTGSRTGKIDFRAIYTGSSNGYDYLNRSNSTNDFGVIRAHAVLLAECNFDFIFGIEHLLNAPYATASNTEYRSCKFPYLNVEKNQDSGTGRGAMLFGEALYNQCDFGNISPYTEVNKLSRDPQCIDINASNCTFNRLVMLDLNHGSNPLPSDYFRLRPSSKLNRFKEEPTSRTVNTTNRAFIMQQFTVPIGTRFDYLENIKTFDSFSDDDISTLDSFEITKIDGNNMDVSTKIEVEGSFVAYVGSSATIELRMKFNNGSDSLLETIALTPGNNAVFKTVIIPKFKTPVWNDFSNQFYTTTTVQTSDPGYTGSVGQKILNLDSSGDLIIYAKITASTGGDVIFGGAFGKLSYMKNYINNY
Physico‐chemical
properties
protein length:761 AA
molecular weight: 84118,68350 Da
isoelectric point:4,93314
aromaticity:0,11958
hydropathy:-0,38528

Domains

Domains [InterPro]
IPR036730
ATT
2–113
IPR036730
DC_0446
STR
3–760
DC_0446
IPR036730
ATT
23–104
IPR036730
IPR009093
ATT
24–102
IPR009093
AUR84607.1
1 761
Architecture
ATT
STR
ATT 2-113 | STR 114-760 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR84607.1
1 761
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,9757
Central domain 207 567 362 0,9855
C-terminal 568 761 193 0,9812
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-567
C-terminal
568-761

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.061.O._10N.286.55.C2
[NCBI] 		1881307 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84607.1 [NCBI]
Genbank nucleotide accession
MG592439.1 [NCBI]
CDS location
range 24225 -> 26510
strand +
CDS
ATGAGTTCAAATTTAATTAAACAACCATACGAGATGATTCTCGACCCAACCGGCGGAGGTGGCAGGGCTAAACCTGTTGCTAACGGTAAATTTTACGTGGGTGAAATAGACAAAGACCCTATCGCAAATCCGCGCACTGACATCGCCTATAAGGATGAGTCAGGACAAGAGCGCCCATTAACATCACCACTAACCCTAAACAACTCAGGCGCGTTTGTAGTAAGCAAAAATGACGGAACTATCATCCAGCCATACATGAAGAATGCTGTTGGGTTTTCCGTTCTCATTCAGGATGCGCGTGGCCGTGATGTTTACTCAGGTTTAAATACTGGCGACCCCGGCAACCTTGAATCGGCCATAGTTGAGTTTCTTCCTGATTATACCGACATAGTTTACAAAGCTTCAGGCGGTAATTCTGCATTTGATAATATGATTGCGGAGTTTCCCATTGCTATAGAGATTAACCAAAAGTGCCAATGCGAAAATGGCACTGTATTTTTGAAAGTCTCGGAAACAGGCACGGATAAGGATTTTGAGCCTGTAGGTGCTATTAATCTTTGTGATTTTGGTTTGAAAGGGGATTATCAGCTATTTGATAGAACTGTAAACCCTAGCGCTACAGATAATAAAAATAACATTCAGGTTGCTTTTGATTTTGCAATTGATGACAGGTACTCGCGAGGTGACTCTAAATTTTACAAGCCATACAAGTATCTACTTCCTTTCTCATATGGAGGTTATGGGTTTTCTGGCGGGGTTATACTTCCGGAGAATTGCGATATTGATTTTGGTGGTAATGACATACATGCAATTGGAAACCCTAACAATGTCTTTGAGTTAAACTTGAGAACAGAAAGAGCAGGAAGGCCAGCGGGTTATTACTATCGTTCGCACACTCAAAACTTTAAGTTTTATAACTTCTTTGTCGGCTCAACAAGAACCTTTGGCGATAAGGAACCGACACCCGACTTTGGTCATATGATAAATATTGAAGGAGGCTGGATAATTAGATCTGGTTTTTATGACATTGGTTGCCGCCCCGGTGCTTCACTAAAATCGATCATAAACCTAGACCTAACACACCCAGACCCAGACAACTATGAGGTTGGTGTCCCTGATGAAGTTGATATGCACAGAATAAGCGCGCAATACGCTCAAAACGCAAGCTACACAATAACCATCAATGGTGACGGAAAGTACGGAATAGGAACAGGCTCTAGAACTGGTAAGATTGATTTTAGAGCTATTTACACTGGGTCTAGTAATGGTTACGACTATCTTAATAGAAGCAACTCAACTAACGACTTCGGTGTGATTCGTGCTCATGCCGTTCTATTGGCCGAGTGTAATTTTGATTTTATTTTTGGCATCGAACATTTATTAAACGCACCTTATGCAACAGCGTCAAATACAGAGTACAGGAGCTGCAAGTTCCCTTACCTTAACGTTGAAAAAAACCAAGATTCTGGGACAGGGCGCGGAGCTATGTTGTTTGGTGAGGCATTATACAACCAGTGCGACTTTGGGAATATATCCCCATACACAGAAGTTAATAAGTTATCAAGAGACCCGCAATGTATAGATATAAACGCTTCCAACTGTACTTTTAACAGATTGGTGATGCTTGACCTAAATCATGGATCAAACCCTCTGCCATCTGATTACTTCAGACTAAGACCGTCGTCAAAGCTGAATAGATTTAAGGAGGAACCTACATCTAGAACAGTAAACACAACAAACCGAGCATTTATAATGCAACAGTTCACTGTCCCTATTGGTACTAGATTTGATTATCTTGAGAACATAAAGACATTTGATTCCTTTTCTGACGATGATATTTCTACGCTTGATTCGTTTGAAATAACCAAGATTGACGGCAATAACATGGATGTTTCAACAAAAATTGAGGTCGAGGGTTCATTTGTTGCTTACGTTGGATCATCTGCAACTATTGAATTAAGGATGAAATTTAATAATGGTTCGGATTCTTTATTGGAAACAATAGCATTAACACCAGGGAATAACGCAGTTTTCAAGACGGTTATAATTCCAAAATTTAAGACTCCTGTTTGGAATGATTTTAGCAATCAGTTCTATACAACAACAACGGTGCAAACATCAGACCCAGGATACACAGGAAGTGTGGGGCAAAAAATACTAAACCTGGACTCGTCAGGTGATTTGATTATTTATGCAAAAATAACAGCGTCCACGGGTGGCGATGTTATATTCGGCGGTGCGTTTGGTAAGCTCTCATACATGAAAAATTACATAAATAACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
37bfe98563828f992142050e7cd9b119ee77166c1f209dbccbea776c1561b6a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5874
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank