Protein

View in Explore
Genbank accession
QAY00003.1 [GenBank]
Protein name
hinge connector of long tail fiber distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MADLKLGSTAGGSVLWHQGNFPLTPVSNDLLYKTYKVYTEYNKPQAVDNDFVSKANGGNYKNNVYFEKGLTFNDTNGYGIKLGARTGGAPFTASFRIKGAFGYETEDGTPFVIFDPSKVVGAKRLTVMGDSLFRQVYDESGRVFSPGNTPTKAQVGLSLVDNAKQVQINNTDMQIMDGVLAAPNFISRNPASGAGHVPRFDQIVQKDSIQDFGYY
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23436,94690 Da
isoelectric point:7,82016
aromaticity:0,12093
hydropathy:-0,37814

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAY00003.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 126 126 0,4222
Central domain 127 204 79 0,1976
C-terminal 205 215 10 0,3703
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-126
Central
127-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcWhh-1
[NCBI] 		2419743 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAY00003.1 [NCBI]
Genbank nucleotide accession
MH791409 [NCBI]
CDS location
range 47069 -> 47716
strand +
CDS
ATGGCAGATTTAAAATTAGGTTCTACAGCAGGAGGTTCGGTATTATGGCACCAAGGTAATTTCCCCTTAACGCCTGTATCAAATGACCTTCTTTACAAAACATATAAAGTTTACACCGAGTATAATAAACCTCAAGCAGTTGATAACGATTTCGTTTCAAAAGCTAACGGCGGTAATTATAAGAACAACGTGTATTTTGAAAAAGGTTTGACCTTTAATGATACTAATGGATATGGTATTAAATTAGGAGCAAGAACCGGCGGGGCTCCGTTCACAGCTTCTTTCCGTATTAAAGGTGCTTTTGGATATGAAACGGAAGATGGTACTCCGTTTGTGATATTTGACCCAAGTAAAGTAGTGGGTGCTAAACGTCTTACCGTAATGGGTGATTCATTATTCCGCCAAGTATATGATGAATCGGGCCGCGTATTCAGCCCTGGCAACACCCCTACTAAGGCCCAAGTTGGATTGTCATTAGTAGATAACGCAAAACAGGTCCAAATAAATAATACTGACATGCAAATAATGGATGGAGTGCTAGCGGCTCCTAACTTTATTTCACGGAATCCGGCCTCTGGTGCAGGACACGTTCCTCGCTTTGACCAGATTGTTCAAAAAGATTCTATTCAAGATTTTGGTTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c2df412c47ae95e02eb7002679bf97307dc14d9de0a8217e9898f1c6d0940d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
EcWhh_1, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank