Protein
View in Explore- Genbank accession
- AYJ75950.1 [GenBank]
- Protein name
- putative tail fiber II
- RBP type
-
TSP
- Protein sequence
-
MAIITGQISLIDYGDALTLTGFITANSPRIQQYSPADEKFTPDWSKTPLILTASLFKMGDSNDIIHDPEVQSINWYDASNAGTPLKTGGPYSVNNETLTIKDNILSDKPAIDFICEVVYRDTDTMMDIPHKMSISFSRVSDGSSAASASAWLPNGNIFKNDRIPSLIAECDLWRSGKIDNTNVSFQWYNQDPTVTEDQGGGAGWRKLTDNSNSGETGYTTRQLTVPSSAVPSFEVYKCIITDTDSSSPTYNQTYQDTVTFLDQSDPVQVSITSTGGDVFKNGVGSTTLSAQVYQGGQEIDKEGEKYQYKWYKYNKEGVLDPEFGGSKTYKEGKTLKVTSEDVDVKATFLCGIDGAVAQFTIYDITDTVVSPTEPANPVEGMIWLKNSGEPPYRFYIYKDGGWQTTDFDSLESLDPDSYNRVKDAYNAITDLDMDNRITRYERSVIRGELANVLGVYLSDTDNMPTIDEVDASGTGDLYSIRKQARDVGVPTTDAKYVQIGAAYTDLKDYLTSLSIKPWDVGSLGVIEVDSDEWDSAWKNYYLAYNFLNITVTNRQKEYTDIVGDGAKKDAIAAVSNADQYQEAPIKNPMTITAPIASLGLPIFEGRHVDIWSLNPDAKNNWAFNRIQPITNPIVSSVGSLTLYGQFYGDGTNNDQFTWDKDGKAVKIKRWADISLDGDFQWVLGEDYTGAKQVLVSNFIDQVPAAMSAQAVKYDGTFLTTIDSSMSTADQVILGDDRVLYISVADTDSGWGEDYAPEPKEIAAYFNGWRMCNGTFETPYNGTGNKVWYPIGDKDLSRSTIVSGGTIFNPVPEDEAPTLEEQTINKYQLVYRTSDAVRQTIDFDGIMSLLQGDNQVSFGYPLNTPYILSGVIKYATNVATVTDNLKYWIPAVQERLSKAEQVITEDSITNIVTNSVQYKAALASKADTEALGDYATTGDLTDLSGDVDGRIANAIDAIDFEPYATKSELKQTATDITAKFQATGGMNLIKNSIGFAGLSFWTGFTDTSVETISTNELDMLGFGSGFLFNPDGNNKGIIQEVGVTPGQPYTLSWYLNKRTSGPDSSFRFWIQIEEDDVVVKQIKDNSATTTTGYESSYMTYIPQSDSIKVKFIGYGNVDATLTGIMLNISDIPLSWSLATGEVYNTNIRLDINGIRVSQLDENRKEIGFTQITPEEFAGYHDSDGNGSFEKIFFLNGDETVTKKLRAEEEITTKFIKMINVDSPARKGLAFIPNIDTVE
- Physico‐chemical
properties -
protein length: 1237 AA molecular weight: 136435,67150 Da isoelectric point: 4,37782 aromaticity: 0,10509 hydropathy: -0,37947
Domains
Domains [InterPro]
DC_0835
STR
125–1223
STR
125–1223
G3DSA:2.60.120.260
STR
985–1123
STR
985–1123
1
1237
Architecture
STR 125-1223 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
1237
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 990 | 990 | 0,8785 |
| Central domain | 991 | 1226 | 237 | 0,4121 |
| C-terminal | 1227 | 1237 | 10 | 0,0881 |
Note: Constraints were applied during segmentation.
Fixed 28 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 28 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-990
1-990
Central
991-1226
991-1226
C-terminal
1227-1237
1227-1237
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage BSP14 [NCBI] |
2301653 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Bacillus subtilis [NCBI] |
1423 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AYJ75950.1
[NCBI]
Genbank nucleotide accession
MH707431
[NCBI]
CDS location
range 53196 -> 56909
strand +
strand +
CDS
ATGGCGATTATTACAGGTCAAATATCATTGATTGACTACGGAGACGCCCTAACTTTAACAGGGTTCATTACAGCAAATAGCCCTAGGATACAGCAGTATAGTCCGGCAGATGAGAAGTTTACCCCTGACTGGTCCAAAACGCCCTTAATTTTAACAGCATCATTATTTAAAATGGGGGATTCCAATGATATTATTCATGACCCGGAGGTACAGAGTATAAACTGGTACGATGCGTCTAATGCAGGTACCCCACTAAAAACAGGTGGACCATACTCTGTTAACAATGAAACCCTCACGATCAAGGACAATATCCTGTCAGATAAGCCAGCTATAGACTTTATCTGTGAGGTTGTGTATAGAGACACGGATACAATGATGGATATCCCTCACAAGATGAGTATTTCTTTTAGCCGGGTGTCTGACGGCAGTAGTGCGGCATCCGCTTCGGCATGGCTACCTAACGGAAATATTTTCAAAAATGATCGGATTCCATCTCTAATAGCTGAGTGTGATCTATGGAGATCAGGTAAGATAGACAATACTAACGTTTCTTTTCAATGGTATAACCAAGACCCTACTGTCACTGAGGATCAAGGGGGAGGAGCCGGGTGGCGGAAACTAACTGATAACTCTAATAGCGGGGAAACTGGGTATACAACACGGCAGCTCACAGTACCCTCCAGTGCAGTACCAAGCTTCGAGGTGTACAAATGTATTATTACAGACACCGATAGCAGCAGCCCTACATACAATCAGACTTATCAAGACACGGTTACATTTTTGGACCAGTCTGATCCTGTGCAAGTATCTATTACTTCTACAGGTGGAGACGTTTTTAAAAATGGAGTAGGCTCAACTACCTTGTCTGCTCAAGTATACCAAGGCGGTCAGGAGATAGATAAAGAGGGAGAGAAGTACCAGTATAAGTGGTACAAGTATAACAAAGAAGGAGTGCTCGATCCAGAATTTGGGGGTTCTAAAACATATAAAGAGGGTAAGACCTTAAAAGTTACAAGTGAGGATGTTGACGTAAAAGCTACTTTCCTATGTGGGATTGATGGTGCTGTGGCTCAGTTCACTATATACGATATTACAGATACTGTTGTAAGCCCGACAGAACCAGCTAATCCGGTAGAGGGTATGATCTGGTTAAAGAATTCAGGAGAGCCACCATATCGTTTTTATATCTACAAAGACGGAGGCTGGCAGACAACAGATTTTGATAGCCTAGAATCATTAGACCCCGATTCCTATAATCGGGTAAAGGACGCTTACAATGCGATTACTGACCTAGATATGGATAATAGAATCACTCGGTATGAGCGTAGTGTTATCCGGGGAGAGCTGGCTAATGTCCTAGGAGTGTATCTTAGTGACACGGATAATATGCCAACTATCGATGAGGTAGATGCAAGTGGCACCGGGGACCTATACTCCATTCGGAAACAGGCAAGAGATGTAGGTGTCCCAACAACTGATGCCAAGTATGTACAGATAGGGGCAGCCTACACAGACTTGAAGGACTATCTCACGAGCTTATCAATTAAGCCATGGGATGTAGGTTCTCTGGGGGTTATTGAAGTAGACAGTGACGAGTGGGATTCTGCTTGGAAAAACTACTACTTAGCCTATAACTTCTTAAATATTACGGTAACCAATAGACAGAAGGAGTACACTGACATTGTCGGGGATGGAGCTAAAAAAGATGCTATTGCTGCAGTCAGTAACGCAGATCAGTACCAAGAAGCCCCTATAAAAAACCCTATGACTATCACTGCTCCAATTGCGAGTCTGGGTCTACCGATTTTCGAAGGTAGACACGTCGATATCTGGTCATTAAACCCGGATGCTAAAAATAACTGGGCTTTTAACCGTATCCAGCCAATAACAAACCCAATCGTGAGTTCAGTAGGGTCTCTTACCCTCTATGGGCAATTCTATGGAGATGGTACCAATAACGATCAGTTCACATGGGACAAGGATGGTAAAGCAGTAAAGATCAAGAGATGGGCAGACATCTCTTTAGACGGAGACTTCCAATGGGTATTAGGAGAGGATTATACAGGCGCAAAACAAGTATTAGTATCTAACTTCATCGATCAAGTACCTGCAGCGATGTCAGCTCAAGCAGTCAAATATGACGGAACATTCCTTACAACAATTGATAGTAGTATGTCAACTGCAGATCAGGTTATCTTGGGGGATGATCGGGTCCTTTATATCTCAGTTGCAGACACAGATAGCGGATGGGGCGAAGACTATGCACCAGAGCCAAAAGAAATAGCTGCCTACTTTAATGGGTGGAGGATGTGTAATGGTACCTTCGAAACCCCATATAACGGAACAGGCAACAAAGTATGGTACCCAATTGGGGATAAGGACTTATCCCGGTCTACTATTGTTTCCGGCGGAACTATTTTTAACCCGGTACCTGAGGATGAAGCACCTACACTAGAGGAGCAGACTATTAACAAATATCAGCTCGTTTATCGAACCTCTGATGCAGTAAGACAAACTATTGACTTTGACGGTATTATGTCGCTGCTACAAGGGGACAACCAAGTTTCATTTGGCTACCCGTTGAATACACCTTATATCTTATCCGGGGTCATTAAGTATGCTACAAACGTAGCTACTGTAACTGATAACCTCAAATATTGGATTCCGGCAGTACAAGAAAGACTTTCTAAAGCTGAGCAGGTTATTACAGAGGACTCCATCACAAATATTGTTACCAATTCAGTGCAGTACAAAGCAGCTCTAGCGTCTAAGGCGGATACTGAAGCTCTAGGTGATTATGCCACAACAGGGGACCTGACGGATTTATCTGGTGATGTCGATGGGCGTATTGCAAACGCCATTGACGCAATTGACTTTGAGCCCTATGCAACAAAGTCTGAGCTTAAGCAAACTGCAACAGACATCACTGCTAAATTCCAAGCAACAGGAGGAATGAACCTTATTAAGAACTCCATTGGCTTTGCAGGACTGAGCTTTTGGACAGGGTTTACAGACACCTCGGTGGAGACAATAAGTACTAATGAGCTCGACATGCTGGGATTCGGAAGTGGGTTCTTGTTTAACCCGGATGGCAATAACAAAGGAATTATTCAGGAAGTAGGAGTTACCCCGGGACAGCCTTATACACTATCATGGTATTTGAACAAACGTACAAGTGGACCGGACAGCTCATTCCGATTCTGGATTCAGATTGAGGAAGATGATGTAGTTGTCAAGCAGATCAAGGACAATAGTGCTACTACGACAACTGGGTATGAGTCTAGCTATATGACGTACATCCCTCAGTCGGATAGTATAAAGGTTAAGTTTATTGGATATGGGAATGTTGATGCGACCCTTACTGGTATTATGCTCAACATCTCTGATATACCTTTATCTTGGTCCCTTGCTACCGGAGAGGTGTATAACACGAATATTCGACTGGATATAAACGGTATCCGTGTTTCCCAGTTAGACGAAAACAGGAAGGAGATCGGGTTCACCCAGATTACTCCAGAGGAATTTGCCGGGTATCACGACTCTGATGGTAACGGTTCCTTTGAGAAGATATTCTTTTTAAACGGGGATGAGACAGTAACTAAAAAATTACGTGCAGAAGAGGAGATCACTACAAAGTTCATAAAGATGATAAATGTAGACTCGCCTGCCCGAAAAGGGCTAGCATTCATCCCTAACATAGACACAGTTGAGTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
9a52578cc7a7ff1e100332b66c55db96b37b76c5bf9f2bf7adecc5ccadd67639
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Complete nucleotide sequence of Bacillus phage BSP14 | Ghosh,K. and Kim,K.-P. | 2018-12-01 | — | GenBank |