Protein

View in Explore
Genbank accession
ASR76011.1 [GenBank]
Protein name
baseplate protein
RBP type
TF
Evidence RBPdetect
Probability 0,64
Protein sequence
MTIKNFTFFSPNGTEFPVGANNDAKLYMLLSEKDYSQFSLRHWETPINTALNRIYKNTSLLVGGRYFELYNEAVALNSNATNFVHANIDISNATNPVTMSVETSDNSNQVDINTGVGVLKKCIEVVETNAMGVSAVTKPSGSSIIEKIYPVGAYYLSSQPTEPATLFGFGTWSRVKGRGLVGVDESDSALSSGGKQGGSTNPLSQHTITPSSGQFVVARGAGKWHWSSGGAPSNSYAMDTENGGITVGDNTNHNNWQPFEAAYIWKRIN
Physico‐chemical
properties
protein length:269 AA
molecular weight: 29052,86020 Da
isoelectric point:5,95379
aromaticity:0,10037
hydropathy:-0,34349

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–139
G3DSA:2.60.520.10 IPR053827
SSF141658
STR
2–139
SSF141658 IPR053827
IPR048780
RBD
2–135
IPR048780
SSF141658
STR
2–150
SSF141658
ASR76011.1
1 269
Architecture
STR
ATT
STR 1-143 | ATT 144-268 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage vB_Llc_bIBBF14
[NCBI] 		2024011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASR76011.1 [NCBI]
Genbank nucleotide accession
MF346933 [NCBI]
CDS location
range 15342 -> 16151
strand +
CDS
ATGACAATTAAAAACTTTACATTCTTTAGTCCAAATGGAACAGAGTTTCCAGTCGGTGCTAATAATGACGCAAAACTGTACATGTTACTTTCTGAAAAAGACTATTCGCAATTCTCACTAAGGCATTGGGAAACGCCTATAAATACAGCTCTCAATAGAATTTATAAAAACACAAGTTTATTAGTTGGTGGAAGATATTTTGAGCTTTACAATGAAGCAGTAGCTTTAAATTCAAATGCTACGAACTTTGTCCATGCAAATATAGACATTTCTAATGCTACAAATCCAGTGACGATGAGCGTAGAAACTTCTGATAACTCAAATCAAGTTGACATCAATACAGGTGTCGGAGTTCTTAAAAAGTGTATTGAAGTTGTTGAAACAAATGCAATGGGAGTAAGTGCAGTCACAAAACCGTCAGGAAGCAGTATTATAGAAAAAATTTATCCAGTTGGTGCATATTACCTTAGTTCGCAACCAACTGAACCAGCTACATTGTTTGGATTTGGGACTTGGTCAAGAGTTAAAGGTCGTGGGTTAGTTGGGGTTGATGAATCTGATTCAGCTTTATCTAGCGGCGGCAAACAAGGTGGTTCAACAAATCCGTTGTCACAACACACAATAACTCCTTCAAGTGGACAGTTTGTTGTCGCTCGTGGGGCAGGAAAGTGGCACTGGTCTTCTGGTGGAGCTCCAAGTAATTCTTATGCTATGGATACAGAAAACGGCGGAATCACAGTTGGAGATAACACTAACCATAATAACTGGCAACCGTTTGAGGCGGCCTATATTTGGAAACGTATAAATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
41bff898c56c4e679319e4d1deb1447bd1b1658c278e3343cb4a646eb424d120
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7765
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Molecular, physiological and phylogenetic traits of Lactococcus 936-type phages from distinct dairy environments Chmielewska-Jeznach,M., Bardowski,J.K. and Szczepankowska,A.K. 2018 30135597 GenBank