Protein

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Genbank accession
XCO35991.1 [GenBank]
Protein name
virion-associated protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MRYALNVAPINGWETHLGQGTAALAADATGVATPVSQGDGVAPIMLDGAAHGNVRQVLFGAAQFGVDAYGFGRIAGPGGLGLIGLDAMGAAKLIAKPTASSQIDIGAAGDSKIAMLLSGAGRIDLTGSGLLEAAMLGSGIGSIELSGSGDARTHHPVYGGGRADILSNATGRAVTIGKNSGAASIAMEAQGIGRLGAHAYGAGAAQVVMDGRGVPRSYRVIYAGGSAVMSLSAAHQITATISGPFEPAPIERQLFVEDDSRTLVVSSDGDRVPGGQVLPRYSDGTIALDLILDAGRYGEASTTGAIDRLDQIVGADMPNNSWGNP
Physico‐chemical
properties
protein length:325 AA
molecular weight: 32503,15910 Da
isoelectric point:5,16527
aromaticity:0,04615
hydropathy:0,12985

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO35991.1
1 325
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,9391
Central domain 21 219 200 0,9288
C-terminal 220 325 105 0,1233
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-325

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage NK-7
[NCBI] 		3233249 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO35991.1 [NCBI]
Genbank nucleotide accession
PP919442 [NCBI]
CDS location
range 43744 -> 44721
strand -
CDS
ATGCGCTACGCCCTCAATGTCGCACCGATCAATGGCTGGGAAACGCATCTCGGCCAGGGGACGGCTGCGCTCGCGGCCGATGCCACGGGCGTGGCGACACCGGTTTCGCAGGGGGATGGCGTAGCGCCTATCATGCTCGATGGAGCCGCGCACGGAAACGTGCGGCAGGTGCTCTTTGGGGCCGCGCAGTTTGGTGTCGATGCATATGGCTTCGGCCGCATTGCAGGCCCCGGCGGCCTGGGCCTGATCGGCCTGGATGCCATGGGCGCGGCGAAGCTGATCGCAAAGCCAACGGCATCGTCTCAGATCGACATCGGGGCGGCTGGCGATAGCAAGATCGCCATGCTGCTGAGTGGAGCGGGACGCATCGACCTGACTGGCTCGGGTCTCTTGGAGGCTGCCATGTTGGGTTCTGGCATCGGAAGTATCGAACTGTCTGGCTCAGGCGACGCGCGCACGCATCACCCGGTCTACGGGGGCGGACGCGCCGACATCCTGAGCAACGCGACCGGCCGCGCCGTCACGATCGGCAAGAACAGCGGCGCCGCGAGCATCGCCATGGAAGCGCAGGGGATCGGCCGCCTGGGCGCGCACGCCTACGGCGCTGGTGCCGCGCAGGTCGTCATGGACGGCCGTGGCGTGCCGCGCAGCTACCGCGTCATCTACGCCGGCGGCAGCGCCGTCATGTCGCTTTCCGCCGCGCACCAGATCACTGCCACCATCTCCGGACCGTTCGAGCCGGCGCCTATCGAGCGTCAGCTGTTCGTGGAGGATGACAGCCGGACACTCGTGGTGTCGAGCGATGGCGACCGCGTGCCGGGCGGCCAAGTGCTGCCGCGCTACTCGGATGGCACCATCGCGCTCGATCTCATTCTTGACGCTGGCCGGTATGGCGAGGCCAGCACCACCGGCGCGATCGATCGACTGGATCAGATCGTCGGCGCCGACATGCCGAACAATTCCTGGGGGAACCCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a0fb4620b6c21c40b25de63c95a77989c3299575e2ecd5a914b7f735ccc990b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2893
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50