Protein

View in Explore
UniProt accession
A0AB39ABG9 [UniProt]
Protein name
Tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSWTIGTATFTNGSAVVTKTGGVDWSNPLNGVREGRMIIDANNVISEILRVDNANQLTLRSAYTAATGSKSYRVPTSPDVSLDTFALDQAAFVAYFQGQIAGYQQLLTGTGNVTITAPDGTSVTVRSQSEWDSLLNKKVTLDTEQVIVGKKVFRQNWESLQLTNESLGQPVYISARDFDGSLRWVLGYETPDANYLSLRNNKANTVILFHSNRNIYVECVDFVINNNTVWTSGNTVVDSGGFIKRASPVINIYADGKFEVTKEAEGISVERIGEGVYKITGCQGMHSDAAWNGIDGGISNPKCRNGLDLVWNDFRVEEDGSIIVKTYHRPHPEAVSFARNEIEGYESGDPIDIPKGMFIQVRVNMPERESEVITGAE
Physico‐chemical
properties
protein length:377 AA
molecular weight: 41382,68290 Da
isoelectric point:4,95138
aromaticity:0,08753
hydropathy:-0,27984

Domains

Domains [InterPro]
DC_0709
STR
1–373
DC_0709
IPR058008
RBD
234–367
IPR058008
A0AB39ABG9
1 377
Architecture
STR
STR 1-373 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0AB39ABG9
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,5388
Central domain 271 366 97 0,1141
C-terminal 367 377 10 0,7959
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-366
C-terminal
367-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage Amona
[NCBI] 		3158137 Uroviricota > Caudoviricetes >
Host Pectobacterium brasiliense
[NCBI] 		180957 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDF89541.1 [NCBI]
Genbank nucleotide accession
PQ008971 [NCBI]
CDS location
range 24207 -> 25340
strand +
CDS
ATGTCTTGGACAATCGGAACGGCAACATTCACAAACGGCAGCGCGGTAGTAACAAAAACGGGTGGCGTTGACTGGTCAAACCCGTTAAACGGCGTGCGCGAGGGGCGCATGATTATCGACGCAAATAACGTGATCAGCGAAATATTGCGCGTAGATAATGCCAATCAATTAACGCTACGCAGCGCATACACCGCGGCCACAGGATCAAAATCATATCGCGTGCCAACATCACCAGATGTAAGCCTTGACACATTCGCGTTGGATCAGGCTGCTTTCGTCGCATATTTTCAGGGGCAGATAGCCGGATATCAGCAGCTATTGACCGGAACAGGAAACGTGACGATTACAGCGCCGGACGGAACCAGCGTGACGGTTCGAAGTCAATCCGAATGGGATAGCCTGTTAAACAAGAAGGTCACTCTTGATACGGAACAGGTAATCGTTGGTAAAAAGGTTTTCAGGCAGAATTGGGAATCGTTACAGCTAACTAATGAATCACTAGGACAACCTGTTTATATTTCGGCGCGTGATTTTGATGGTTCTTTACGGTGGGTTTTAGGTTATGAAACGCCAGATGCGAATTATCTTTCATTGCGAAATAACAAGGCTAATACGGTTATTCTTTTTCACAGCAACCGTAACATCTACGTGGAATGCGTTGATTTTGTCATAAACAATAATACTGTTTGGACATCAGGTAACACTGTCGTTGATTCAGGCGGGTTTATAAAACGCGCATCACCAGTAATTAATATTTACGCTGACGGTAAATTCGAAGTAACGAAAGAAGCTGAAGGAATTAGCGTTGAGCGCATTGGCGAAGGGGTTTATAAAATAACCGGATGCCAGGGAATGCATTCTGATGCCGCGTGGAACGGAATAGACGGGGGGATTAGTAACCCGAAATGCCGAAATGGATTAGATCTGGTTTGGAACGATTTCAGGGTTGAAGAAGACGGATCCATTATCGTTAAAACATATCATCGCCCACACCCTGAAGCTGTTTCTTTCGCAAGAAATGAAATCGAAGGATATGAAAGCGGGGATCCTATAGACATTCCGAAAGGGATGTTCATTCAGGTTCGTGTAAATATGCCTGAGAGAGAATCTGAAGTAATTACTGGCGCGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4f383993ce7671889c3bae4fc053e1db4ba97ecae054895c91a435d4a7f65ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8506
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 38986742 PubMed