Protein

View in Explore
Genbank accession
YP_007003096.1 [GenBank]
Protein name
tail fiber protein/ lysozyme
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATTITNFLVGLGMDTTEFDKGQRNVTSGLDSMRSKALQLGALAGGAFGAKALTFGFAEAADNIGKFSEVFSVIPDDIRAMGAALAQEGGSLESFMAQIETLERLRASTPQQIGALFAEAGIRGVDPSVILSAKSATDAYLALADVFDDLTAKQRLAVAPVFGLDEASIRLLSKGRQEVESMVERQRDIRPLTTQMTEEAGRFNRQWKDIQNNIGSIADQISVGILPPLTDLVGELDDWVDANKELINSGINDFTAVFADNIHEIAIAGGILATGGLLTGLAGMAKYVPLIGGGLATAAMAARTITGIGAAGMAAYVGADIVDEKLRENISGYDEWDAKVTRYIYDITGIDLSRGNVNEGTERSTGSTKRYSSDEMDTMARDMMTRLPTIEPTLFSSGMVAPQTQRNSQPAPQNDRPIQINMILDGQVLDSRIIDVTSRMDETTIDELSSSTAR
Physico‐chemical
properties
protein length:454 AA
molecular weight: 48522,20950 Da
isoelectric point:4,52407
aromaticity:0,05507
hydropathy:-0,08612

Domains

Domains [InterPro]
DC_0145
STR
1–454
DC_0145
YP_007003096.1
1 454
Architecture
STR
STR 1-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CP-T1
[NCBI] 		10689 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007003096.1 [NCBI]
Genbank nucleotide accession
NC_019457.1 [NCBI]
CDS location
range 34708 -> 36072
strand +
CDS
ATGGCTACGACGATCACTAATTTCCTAGTCGGTCTAGGAATGGACACAACGGAGTTTGATAAAGGTCAACGTAACGTAACGTCGGGCCTTGATTCAATGCGCTCCAAAGCGTTGCAACTCGGCGCTTTAGCAGGTGGTGCGTTCGGCGCTAAAGCGTTAACTTTCGGATTCGCCGAAGCTGCCGACAATATCGGTAAATTCTCTGAAGTGTTCAGCGTTATCCCTGACGATATCCGCGCCATGGGTGCAGCGCTGGCGCAAGAGGGTGGATCGCTTGAATCGTTCATGGCGCAAATTGAAACCTTAGAACGGTTACGAGCATCTACGCCACAACAGATCGGGGCGCTTTTTGCTGAAGCGGGGATACGTGGTGTAGACCCTTCTGTTATCCTATCCGCTAAATCAGCGACCGACGCGTATTTAGCGTTAGCCGATGTATTCGACGATTTGACCGCTAAACAACGACTCGCCGTAGCGCCTGTTTTTGGATTAGATGAGGCGAGCATCAGACTGTTGTCAAAAGGTCGTCAAGAGGTTGAGTCAATGGTTGAACGTCAGCGCGACATTCGACCTCTAACTACTCAGATGACCGAAGAGGCGGGACGCTTTAACCGTCAATGGAAAGATATTCAAAATAATATTGGCAGTATTGCCGACCAGATCAGCGTGGGTATATTACCACCGTTAACCGATCTCGTGGGCGAGTTGGACGATTGGGTTGATGCTAACAAGGAATTAATAAACAGCGGTATTAACGACTTTACTGCGGTGTTTGCCGACAATATCCACGAGATTGCTATTGCGGGTGGAATACTCGCTACGGGTGGACTATTAACCGGCCTTGCAGGAATGGCTAAATACGTACCGCTTATCGGCGGTGGTTTAGCTACGGCAGCGATGGCGGCACGTACCATTACGGGTATAGGTGCAGCGGGCATGGCTGCGTATGTGGGCGCGGATATCGTCGATGAAAAGTTACGTGAAAACATCAGCGGGTATGATGAATGGGACGCCAAAGTTACTAGATACATTTATGACATCACGGGGATTGATTTATCTCGCGGTAATGTTAACGAGGGTACGGAACGTTCTACAGGTTCGACCAAGCGTTATTCTAGCGATGAAATGGATACCATGGCGCGTGACATGATGACGAGATTACCGACGATTGAACCTACACTTTTTAGTTCGGGTATGGTAGCCCCTCAAACTCAACGTAACTCCCAACCTGCACCACAAAATGATCGACCCATACAGATAAACATGATCCTTGACGGTCAGGTGTTGGACTCACGTATAATCGATGTAACATCACGTATGGATGAGACGACTATTGATGAATTGTCATCATCTACGGCGCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0aed51774f55a0e78187850f2223dcb506bdcfe79afeacd542bd662a1a6f9dd1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7220
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50