Protein

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Genbank accession
XYM60230.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MRQILPSAKAYLANNDKIRLAYLVSIELPGSTGNNAVYAYMTDYMRDINYGGILFQSGKIKTISSHKQNRTLTVGSLNFSVTGTDANEVIKLVQSGVSFLDRSISIYQAIIDDNGEILPVDPDTNGPLLFFRGKIVGGGIKESNTVSGVGTSVITWNCSNEFYDFERVAGRFTDDASHRGLEIVNGELLPSHGAKRPEYQEDYGFFHANKSVNFLAKYQVKEERYKLESKKKLFGLSKSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGTQKVPGIPVFADTERNNPNVVYVVYAFCEGEIEGFLDFQFGDAPMICTDQTDSTSRTCFGQKRVSGDTMARISTGLPSTSLSEHGQEYKYNDGNGDIRIWTFHGKPDQTVATVLRDIAAANNFFLQGENGNGPEYWDSRYKLLDTAYAVIRFTITENRTDIPEVSAELSGRKVKVYQADGSVRTDKTSQNGVWQTFDYLTSTTFGASIPIDRMVIGDWRKEADLLNIIDTSYQTSWQPFWRYVGWESWTAENRQIMQMNTILDNSNSVFKNVQELLESFQGALNNLSGIFRITVEKDSKTPLELNFLDTYGDLDLSDTTGRNKYNSVQASLIDPTLNWKTNSITFYNSKFKNEDRGVDKKLQLSFANITNYYTARSLADRELKKSRYSRSLSFSLPYKFLGIEPNDPVVFTYDRYGWNKKFFLVDEVENTRDGKINVTLQEYGEDVFINSTQVDNSSEVVPEISNNVLPPRDFKYTPTPGGMVGDVGKNGELSWLPSLTPNVVYYSIRKSDRVDPYIVQQNAFTPNVKMYQDIVGEPAGLTIFEIRAVDINGRRSSPVTISVDLNSAKNLSMVENFRVLNLSPDPAEWVGPDLELGWDKLQEEGLISGIFYTLEIRDNTNKLLRSVKITSLYNYSYLLGYNKLDYKANNSNTLGIYRALQPRIQAEGPKGEKSVAWAYI
Physico‐chemical
properties
protein length:948 AA
molecular weight: 107014,73510 Da
isoelectric point:5,38859
aromaticity:0,11603
hydropathy:-0,43133

Domains

Domains [InterPro]
DC_0187
STR
232–930
DC_0187
IPR032876
ATT
593–696
IPR032876
XYM60230.1
1 948
Architecture
STR
ATT
STR
STR 232-592 | ATT 593-696 | STR 697-930 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM60230.1
1 948
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9393
Central domain 313 541 230 0,4281
C-terminal 542 948 406 0,0029
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-541
C-terminal
542-948

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebseilla phage SEL21
[NCBI] 		3414246 Viruses >
Host Klebsiella variicola
[NCBI] 		244366 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM60230.1 [NCBI]
Genbank nucleotide accession
PV402694.1 [NCBI]
CDS location
range 90513 -> 93359
strand -
CDS
ATGAGACAGATCCTTCCTTCTGCGAAAGCCTACCTTGCCAACAATGACAAGATACGATTAGCGTATCTTGTCTCTATCGAACTCCCGGGGTCCACGGGTAATAACGCTGTTTATGCTTATATGACGGACTACATGAGAGATATCAACTATGGTGGTATACTCTTCCAATCAGGGAAAATTAAAACAATTAGCAGTCACAAACAAAACCGTACGTTAACCGTCGGCAGTTTGAACTTCAGTGTTACTGGTACGGATGCCAATGAAGTCATAAAGCTCGTGCAAAGTGGTGTATCATTTTTAGATCGCTCTATTTCTATATATCAGGCGATCATCGACGATAATGGGGAAATCCTTCCGGTGGACCCAGATACTAACGGCCCTTTACTCTTCTTTAGGGGTAAGATCGTGGGTGGTGGTATTAAAGAAAGTAATACAGTATCCGGAGTTGGTACTTCTGTTATAACCTGGAACTGTTCTAACGAATTCTACGATTTTGAGCGAGTTGCTGGACGCTTCACAGACGACGCTTCCCACCGAGGACTTGAGATTGTAAATGGAGAATTACTACCTTCTCACGGCGCCAAACGACCGGAATATCAAGAGGACTACGGATTCTTCCACGCCAACAAGAGCGTTAACTTCCTAGCTAAATATCAAGTAAAAGAAGAACGATACAAGCTGGAATCTAAAAAGAAATTATTCGGTCTCTCCAAGAGCTACAGTCTTAAAAAGTATTATGAGACTGTCACTAAAGAAGTAGACCTGGACTTCAACCTTGCAGCCAAGTTTATTCCTGTAGTATATGGTACTCAAAAAGTTCCTGGTATCCCGGTTTTCGCGGATACAGAGAGAAACAATCCAAACGTTGTGTATGTGGTTTACGCGTTTTGTGAGGGTGAGATTGAAGGATTCCTCGACTTCCAGTTTGGGGATGCCCCTATGATCTGTACTGATCAAACTGACAGTACCTCTCGTACGTGCTTTGGACAAAAAAGGGTGTCGGGAGATACTATGGCAAGAATTTCCACAGGACTTCCGTCAACATCTCTCTCAGAGCATGGTCAAGAATACAAGTACAATGACGGTAACGGGGATATACGAATCTGGACATTCCACGGTAAGCCAGACCAGACGGTAGCTACGGTACTAAGAGATATTGCTGCTGCTAACAATTTCTTCCTTCAAGGAGAGAACGGTAATGGTCCGGAGTACTGGGATTCTAGGTACAAGTTATTAGACACCGCATACGCTGTCATACGCTTCACTATCACGGAGAACAGAACTGATATTCCTGAAGTATCAGCAGAATTAAGCGGACGTAAAGTAAAAGTATACCAGGCAGATGGCTCTGTTAGAACAGATAAAACCAGCCAAAATGGTGTATGGCAAACATTCGACTACCTAACCTCCACTACCTTTGGTGCAAGTATCCCGATAGACAGAATGGTGATTGGTGACTGGAGAAAAGAGGCCGATCTATTAAACATTATAGACACCTCTTATCAAACTAGTTGGCAACCTTTCTGGAGATACGTTGGATGGGAGAGCTGGACAGCCGAAAACAGACAAATAATGCAAATGAACACAATCCTGGATAACTCCAACTCTGTGTTCAAAAACGTGCAGGAGCTATTAGAGTCCTTCCAGGGAGCGTTGAATAACCTATCAGGTATCTTCCGCATCACCGTAGAGAAAGATTCAAAAACTCCTCTAGAACTTAATTTCCTAGATACTTATGGGGACCTGGATCTCTCAGATACTACAGGCCGTAATAAGTACAACTCAGTTCAGGCATCTCTGATTGATCCTACCCTGAACTGGAAAACCAACTCTATAACGTTCTATAATTCTAAGTTTAAGAATGAAGATCGTGGAGTTGACAAGAAACTTCAACTTTCTTTTGCTAACATAACCAACTACTACACTGCTAGAAGCTTGGCAGATAGAGAGCTTAAGAAGTCTCGTTACTCTCGCTCTCTGAGTTTCTCTTTACCTTACAAATTCCTTGGTATAGAACCTAATGATCCTGTAGTATTCACCTACGATCGTTATGGCTGGAATAAGAAGTTCTTCCTAGTAGATGAGGTGGAGAACACAAGGGATGGTAAGATAAACGTAACTCTTCAGGAGTATGGTGAGGATGTATTTATTAACTCAACGCAGGTGGATAACAGTAGCGAGGTCGTTCCTGAAATATCCAATAACGTCCTGCCACCAAGAGACTTTAAGTATACCCCTACACCTGGTGGAATGGTAGGTGATGTTGGCAAAAACGGAGAGCTTTCATGGCTTCCTAGCTTAACACCTAACGTAGTCTATTACTCGATACGTAAATCAGATCGTGTGGATCCTTATATTGTGCAGCAGAACGCTTTTACCCCTAATGTTAAGATGTATCAGGATATTGTGGGTGAACCTGCCGGGCTAACAATTTTCGAGATCCGTGCTGTTGATATTAATGGTCGTCGTAGCTCTCCAGTAACAATTTCTGTAGATTTGAACTCAGCTAAAAACCTTAGTATGGTAGAAAACTTCCGGGTGCTTAACCTTTCTCCTGACCCTGCAGAATGGGTTGGACCTGACTTAGAGTTAGGGTGGGATAAGCTACAGGAGGAAGGGCTGATTTCAGGGATTTTCTACACACTTGAAATAAGGGACAACACTAATAAACTGCTTAGATCCGTGAAGATCACCAGTTTATATAACTACAGTTACCTGTTGGGCTACAATAAGCTCGACTACAAGGCCAACAACTCGAACACTTTGGGGATTTATAGAGCACTTCAGCCAAGAATTCAGGCGGAGGGACCAAAGGGCGAGAAGTCGGTTGCATGGGCATATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ff8a4a414a13e4e4c61f493389a33c63b387c8235cd508b46f711576147cfa2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8654
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50