Protein

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Genbank accession
XCO36692.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSWQESVKPAGTQDIQCDIEYLDKSYIHVYLDGAETAAFTWTSSTNIRLNSPLSAETAVLLIRKTEREYLYIEFASGAPFVEDNVDTQNTQLLHLAQELVEGRYIEGFYGDINMHRYRITNLGDPVDARDAANKQYVDAGDARLDQRIDAEAAARMAADAALDVRATNLEQTYFNANTNSFSWWTITTEDTNTITPGMPFTKAKVRLNGLTKTAGYSYSIIDNTVVFAETIPAGTLVDMTIGVDTEADTSAVSTVLTLLSAESGAGYIGGLNYVTPEMSGLLTGVGNADDDTAAIQWALNQNAAQVVLDSTKTYNVHPGVIQHTGKVNVDAGAAKIVCDGVAVDIIDGAGSVWRGGNLLSKTTPWTVVYDKDFNIVESGTLGYGRMPHQDDANVDPSHYYQQICCTLVFRSSTSSVLDGLTVADVNGSYAAVVAAGFKNTKWTGNKIRGGALAGAIMVLNDCELPVTAGFGWNAGVDVSYGNPFKWARGSNHTFENCDLFEGRQMGLCVTGSDYLTISNVNTYDNAESGVQTGQYSSAYPQESIICKHVTQIGCKSWGNYYDGLDHASVTSGAAGPYFEKYLNVANCEVFDNRATGIFVQGNNLQIGDNNFHDNGTHGIRVQDSSVVDISWNQCEGNGRLGGGYQILAVGSDMVLSENRVLNASQTNSHLVNISIGLQAILKFGVKFHNTPLSTRTSPKTVLGVGVLMSGTEKTSDGSEASYSGARTASYIPVPIAGDTRTQSVASEAGAVAAWKHPATGAWMRLFTNDLTGATNTGFSFGYNWGKSTANPSGYWDNAGIGGTLFTVNPTSFVFDIHPAGSMTSAGGFNISATVIRPSVDSAMSCGQSSFRFTQLFAVNSTIGTSDAREKTVPCNPTDAEISAFYEISLLPWAWQWLEKYQAEGDNARLHSGPTVQAAIAIMDKHGLDWTRYAAFCYDEWDAWEGGIDPVTMVYVPPYEAGYRYGFRKEELLLWMLRAIVCKQQSLESRIQALETASNK
Physico‐chemical
properties
protein length:1001 AA
molecular weight: 108158,97530 Da
isoelectric point:4,79337
aromaticity:0,09990
hydropathy:-0,18891

Domains

Domains [InterPro]
DC_1609
STR
1–450
DC_1609 IPR039448 IPR036388
IPR005604
ATT
12–102
IPR005604 IPR012334 IPR036388
IPR011050
STR
416–754
IPR011050 IPR030392
IPR006626
Unmapped
491–513
IPR006626 IPR006626 DC_0504 cd10144
IPR006626
Unmapped
581–602
IPR006626 IPR006626 IPR030392
XCO36692.1
1 1001
Architecture
STR
ATT
STR
RBD
STR 1-11 | ATT 12-102 | STR 103-754 | RBD 845-999 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO36692.1
1 1001
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,9919
Central domain 287 715 430 0,9895
C-terminal 716 1001 285 0,9310
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-715
C-terminal
716-1001

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_066010
[NCBI] 		3232184 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO36692.1 [NCBI]
Genbank nucleotide accession
PP889454.1 [NCBI]
CDS location
range 40974 -> 43979
strand +
CDS
ATGGCATACAGCTGGCAAGAGTCGGTAAAGCCTGCGGGTACCCAGGATATCCAGTGCGATATTGAGTACCTGGATAAGTCCTATATTCACGTTTACTTAGACGGTGCTGAGACTGCTGCCTTTACTTGGACCAGCTCCACCAATATTCGTCTGAACTCTCCGCTATCTGCAGAGACAGCGGTACTCCTCATTCGTAAGACTGAACGAGAGTATCTCTATATTGAGTTTGCTAGTGGCGCTCCGTTCGTTGAAGACAACGTAGATACTCAGAATACGCAGCTCCTGCACCTGGCCCAAGAGCTAGTTGAGGGACGTTATATCGAGGGATTCTACGGCGACATTAACATGCACCGTTACCGCATCACTAACCTGGGTGACCCGGTGGATGCAAGAGACGCTGCTAACAAGCAATACGTCGATGCCGGGGATGCCCGGCTAGACCAACGTATTGATGCAGAGGCAGCTGCCCGTATGGCTGCAGATGCAGCCCTGGACGTACGCGCCACTAATCTAGAGCAAACCTACTTCAATGCAAATACTAATAGCTTCTCATGGTGGACGATTACAACCGAAGATACAAACACTATCACCCCCGGGATGCCATTTACAAAGGCCAAGGTAAGGCTAAACGGTTTAACGAAGACTGCTGGCTACTCATACAGTATTATTGATAACACAGTAGTGTTCGCCGAAACTATTCCTGCGGGTACGTTGGTGGATATGACCATTGGCGTGGACACAGAAGCAGATACATCCGCCGTGTCTACTGTGTTAACACTGCTGTCAGCGGAGAGTGGTGCAGGTTATATTGGTGGCCTTAACTACGTTACACCTGAAATGTCCGGACTATTAACAGGTGTTGGCAATGCTGACGACGATACGGCGGCTATCCAGTGGGCGCTGAACCAGAACGCGGCCCAGGTTGTTCTCGACTCAACGAAAACCTACAACGTCCATCCTGGAGTTATTCAACACACCGGTAAAGTAAATGTTGACGCCGGTGCGGCTAAAATTGTCTGCGATGGTGTAGCTGTTGATATTATTGATGGTGCTGGGTCAGTGTGGCGCGGCGGTAACTTACTCAGCAAAACAACTCCGTGGACAGTTGTGTATGACAAAGATTTCAATATTGTTGAAAGCGGAACCTTGGGTTATGGGCGCATGCCACACCAGGACGATGCAAACGTAGACCCCTCTCACTATTACCAGCAAATTTGTTGCACACTAGTATTTCGGTCTTCTACTTCGTCTGTTCTTGACGGATTAACTGTGGCTGATGTGAACGGTAGCTACGCCGCAGTAGTAGCGGCAGGTTTCAAAAATACTAAATGGACAGGCAACAAAATAAGGGGCGGCGCGCTCGCTGGCGCCATTATGGTGCTCAACGACTGTGAGTTACCCGTTACGGCTGGTTTTGGATGGAATGCTGGCGTAGACGTGTCTTATGGAAACCCTTTCAAATGGGCGCGCGGTAGCAATCACACCTTTGAAAACTGCGACCTATTCGAAGGTCGGCAGATGGGACTTTGCGTCACTGGCTCGGACTACCTGACTATCTCTAATGTTAATACATATGATAACGCGGAGTCTGGGGTGCAGACAGGTCAATACAGTTCCGCGTACCCACAAGAAAGCATCATCTGTAAGCACGTCACTCAGATAGGGTGTAAATCATGGGGGAACTATTATGACGGTCTTGACCATGCCTCAGTAACTAGTGGTGCTGCTGGTCCATACTTCGAGAAATACCTTAACGTCGCTAACTGTGAGGTATTTGACAACCGCGCCACCGGCATATTTGTCCAGGGCAACAACCTTCAAATTGGTGACAACAACTTCCACGACAATGGTACTCACGGAATACGAGTACAGGATTCGTCCGTGGTTGATATTTCATGGAACCAATGTGAAGGCAATGGTAGATTAGGTGGTGGCTATCAAATTCTGGCCGTAGGTTCAGACATGGTGCTGTCAGAAAACCGTGTTCTAAATGCCTCACAGACGAATTCACACTTAGTCAACATCAGTATTGGATTGCAGGCCATACTAAAATTCGGTGTTAAGTTCCATAATACCCCACTTAGTACGAGGACATCACCCAAAACTGTTCTCGGTGTAGGTGTGTTGATGTCCGGCACAGAAAAAACATCTGATGGCAGCGAGGCGTCGTATTCTGGGGCTAGGACGGCTAGCTACATCCCGGTCCCCATCGCAGGTGATACGCGCACACAGAGTGTAGCTTCCGAGGCGGGAGCAGTAGCTGCGTGGAAACACCCCGCTACTGGTGCCTGGATGCGGTTGTTTACCAACGACCTGACTGGGGCAACTAACACCGGGTTCTCATTTGGGTACAACTGGGGGAAAAGCACCGCTAACCCATCTGGCTACTGGGACAACGCCGGTATAGGTGGCACGCTATTCACCGTCAACCCAACATCTTTTGTCTTTGATATACACCCCGCTGGGTCTATGACTAGTGCCGGAGGGTTCAATATCTCCGCTACCGTTATCCGGCCTAGTGTGGACAGTGCCATGTCCTGCGGACAGTCGTCCTTTAGGTTTACTCAGCTGTTTGCTGTTAACAGCACTATAGGCACTAGTGATGCTAGAGAAAAGACAGTCCCTTGTAATCCTACGGATGCTGAGATTTCTGCTTTCTACGAAATAAGCCTGCTGCCTTGGGCCTGGCAGTGGCTTGAAAAGTATCAAGCAGAGGGCGACAACGCGAGACTACACTCAGGGCCAACGGTACAAGCTGCAATCGCCATAATGGATAAACACGGTCTTGACTGGACCCGTTATGCCGCATTTTGTTATGACGAGTGGGACGCCTGGGAAGGGGGTATTGACCCGGTAACTATGGTGTATGTTCCTCCTTACGAAGCCGGGTACCGTTATGGGTTCCGTAAAGAAGAACTGCTCCTTTGGATGTTGCGGGCCATTGTATGCAAGCAGCAGTCTCTAGAGAGCCGAATCCAGGCACTAGAAACGGCAAGCAATAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e535b6de7ce53cf0a2cf1ba8dd5407e4a7c437cabe7afd099cda94bbe2f3c2e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6802
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank