Protein

View in Explore
Genbank accession
XCO40921.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTKGAVVASSDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIADAVEFFKDFDFEALQNLANQVKADSEAAGASAAAAAASEGAAKTSETNSKASEQAALTARQQAGSARDQTQDLYNQTVDLVAGVQAPDKLPTSPGSSRAWMKIANVKNAGQSNCFAQFIIGGGANFGSANLPVDIFSISGRGLPDTLTSNNIDANFTQCALIAAKNSTSRLKLGVVKNTDGSFDVYLLSPNGYFPVMWLNRLNVQSNNGLITGPIIDRTGYSWITTEPAGIVYNSPTDYLMANDSTIPRTNVANTFSQPQAISVPGGNATLTLNGCVVRANNSNAIVYSIPESGQGMYFRPNGDMNSAKQVVFDASNFTVTGLNARFSNAVTMSSTLRVNGSSNLRGGVDVTASQGLPLKETTATTGIGVNFIGNNATECSFGIENTAGGSAVFHNYARGASNSATKNNQLLGGYGSRPWLGSAYTAHSNAALHFLGAGDASDTNHGGWIRLLVTPKGKNIGWRSPVLRISDNGDTWLAVAGSMVSPDLDEVRSFETLNAAVPKFNAPTNQDGRGLKIVADGAPEINMIAPRASATSSPAVRAMWCDGSLSNSDKYIGATQQWSTFFFGASGHDGEKFDSMRGAVNIQATAGWSKTETPTRIVFETCASGSTTRTSRWSVDHNGTLTPMADNTYDLGWGSGRVRNIYAANGTINTSDARLKNDVRMMSDPETEAAKAIAKEIGFWTWKEQADMNDIREHCGLTVQRAIEIMESFGLEPFKYGFICYDKWDEHMVVSEYGQANEDGTENPIYKTIPASDRYSFRLEELNLFIAKGFEARLSALEDKLGM
Physico‐chemical
properties
protein length:883 AA
molecular weight: 94159,73850 Da
isoelectric point:5,18067
aromaticity:0,08267
hydropathy:-0,23918

Domains

Domains [InterPro]
DC_0313
STR
1–881
DC_0313
IPR036388
RBD
737–882
IPR036388
IPR030392
CHP
751–881
IPR030392
cd10144
CHP
751–873
cd10144
IPR030392
CHP
751–810
IPR030392
XCO40921.1
1 883
Architecture
STR
STR 1-882 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40921.1
1 883
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,7560
Central domain 234 432 200 0,5426
C-terminal 433 883 450 0,9048
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-432
C-terminal
433-883

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146047
[NCBI] 		3232226 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40921.1 [NCBI]
Genbank nucleotide accession
PP889496.1 [NCBI]
CDS location
range 20721 -> 23372
strand -
CDS
ATGGCCGCAGACGGAACCGTTACCGGGACTGGCACAAAATGGCAATCTTCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCGATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAAAGGCGCTGTCGTAGCGTCTAGCGATTACGCGATCCTGTTAAGCGACTCGCTGACCGTTGACGGACTGGCGCAAGATGTTGCTGAAACCCTGCGCTACTATCAGTCGCAGGAAACCGTAATTGCGGATGCAGTCGAGTTCTTTAAGGATTTTGATTTCGAAGCACTTCAAAATCTTGCTAATCAGGTGAAGGCAGACTCAGAAGCTGCGGGCGCAAGCGCTGCGGCGGCTGCTGCGTCAGAAGGGGCGGCGAAAACTTCAGAAACTAACTCTAAGGCCTCGGAGCAAGCGGCGCTAACAGCACGGCAACAAGCAGGGTCTGCAAGGGATCAGACTCAAGATCTCTATAACCAGACTGTCGATCTTGTGGCTGGCGTTCAAGCGCCGGATAAGCTGCCAACCTCGCCAGGAAGCTCGCGGGCGTGGATGAAGATTGCCAACGTTAAGAACGCTGGACAGTCAAACTGTTTTGCGCAATTTATTATTGGTGGCGGCGCTAACTTTGGTTCGGCAAATCTCCCGGTAGATATCTTTTCTATTTCTGGCCGTGGTCTTCCCGATACGCTAACAAGTAATAATATTGACGCCAACTTTACTCAATGCGCACTGATTGCCGCAAAAAATAGCACATCACGTTTGAAGTTGGGGGTTGTGAAAAACACCGACGGATCTTTTGATGTTTATTTGCTCTCGCCTAACGGTTACTTTCCCGTTATGTGGTTAAACCGTTTGAACGTGCAATCTAATAATGGGTTGATTACCGGGCCGATCATCGATCGCACTGGTTATTCGTGGATTACCACGGAGCCAGCCGGGATTGTATATAATTCACCGACTGATTATTTGATGGCTAACGATAGCACGATCCCGCGCACCAACGTAGCTAACACGTTCAGTCAACCACAAGCGATCAGCGTGCCTGGCGGAAACGCTACGCTGACCCTGAATGGTTGCGTGGTTAGGGCCAATAACAGCAATGCGATCGTGTACTCAATCCCTGAAAGCGGTCAGGGGATGTACTTCCGCCCTAATGGCGATATGAATAGCGCAAAGCAAGTTGTCTTTGATGCATCAAACTTTACTGTTACCGGATTGAATGCCCGCTTTAGCAACGCCGTTACAATGTCAAGCACGCTACGCGTTAACGGATCTTCTAACCTTCGCGGCGGCGTAGATGTTACCGCATCTCAGGGTTTGCCATTGAAGGAAACGACCGCAACAACCGGGATTGGCGTTAACTTTATCGGCAACAACGCAACGGAGTGTTCTTTCGGTATTGAGAATACGGCTGGCGGATCTGCTGTATTCCATAACTATGCACGCGGCGCGTCAAATAGCGCCACAAAGAACAACCAGCTTTTAGGCGGTTATGGATCTCGACCGTGGTTAGGTTCTGCGTATACCGCGCACAGCAACGCCGCCTTGCATTTCTTGGGCGCTGGCGATGCATCAGACACCAATCACGGCGGGTGGATTCGTCTATTGGTTACGCCTAAGGGGAAAAATATTGGATGGCGCTCTCCAGTCCTGCGAATTTCTGACAATGGTGATACGTGGCTGGCCGTCGCTGGTAGCATGGTGTCGCCTGATCTAGATGAGGTGCGTAGCTTTGAAACGCTTAACGCGGCAGTTCCGAAATTCAACGCTCCAACCAATCAGGATGGTCGAGGGCTGAAAATTGTGGCGGATGGTGCGCCGGAAATTAACATGATTGCCCCTCGCGCTTCTGCTACATCATCGCCTGCGGTAAGGGCAATGTGGTGTGATGGTAGCTTGTCGAACTCGGACAAATATATTGGCGCTACGCAGCAATGGTCTACTTTCTTCTTTGGGGCGTCAGGCCATGACGGAGAAAAATTCGACTCAATGCGCGGAGCGGTTAATATTCAGGCTACTGCCGGATGGAGTAAAACTGAAACACCAACGCGAATCGTGTTTGAAACATGTGCGTCAGGCTCAACTACTCGAACCTCTCGATGGAGCGTTGACCACAATGGAACCCTAACTCCTATGGCCGATAATACTTACGACTTGGGCTGGGGTAGTGGTCGAGTCAGAAACATCTACGCAGCAAACGGGACAATCAATACCTCCGATGCTCGGTTGAAGAATGATGTTCGCATGATGAGTGACCCTGAAACCGAAGCGGCCAAAGCAATTGCGAAGGAGATCGGGTTCTGGACATGGAAGGAGCAAGCAGATATGAACGACATTCGCGAGCACTGCGGTTTGACCGTACAGCGTGCAATTGAGATCATGGAAAGTTTTGGGCTTGAGCCGTTCAAATATGGTTTCATCTGTTATGACAAATGGGATGAGCATATGGTTGTTTCTGAATACGGGCAAGCAAATGAAGATGGAACTGAAAACCCGATCTACAAAACAATCCCGGCCAGTGATCGCTATTCATTCCGCCTTGAGGAGTTGAATCTGTTTATCGCAAAAGGATTTGAAGCGCGGTTATCCGCACTTGAGGATAAATTAGGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5084e76e4382ecaeea8b8e6464f76e94ea2c00e707718c386d51ffc87fd42e4d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6160
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank