Protein

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Genbank accession
XPO96504.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MIQKVISGSKGGSQKPHNPVEMEDNLISINKIKILLAVSDGEIDETFSLKQLMFNSVPVQNEDGSFNFEGVKAEFRPGTQTQEYIKGMEDSSSEVTVNREVTTDNPYTISVTNKTLSAIRIKMFMPSGVRIESNGDKNGVRVEYEVQQAVDGGSFETVLTDVIEGKTMSGYDRSRRVNLPNFNNQVIFRVVRKTPDSNDSNVVDAIQVRSYAEVIDAKFRYPLTGLLFVEFDSKMFPNQLPTISIRKRWKIINVPSNYDPESRTYNGNWDGTFKKAWTNNPAWVLYDLMINQRYGLDQKELGISVDKWALYEAAQYCDQMVPDGKGGTEPRYLCDVIIQSQTDAYKVIRDICSIFRGMSFWNGESISVIIDRPREPAYIFTNDNVVNGDFSYTFASEKSMYTTCNVMFDDEQNMYQQDVEPVFDREATLRFGNNVTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVVAIADNFWSSNLTMNLSGRLLEVSGSQIFLPFRVDARAGDFIIVNKPDGKPVKRTISSVSADGKTIEINIGFGFPVKPNTVFAIDRTDIALQQYVVTKIDKGDDDEEFTYKITAVEYDPNKYDEIDYGVNIDDRPTSIVEPDQIPKPENVQVSSESRIVQGMSVETMIVSWDKVPYAVFYDVQWRKDNGNWQNVPQTANKEVYVEGIYAGNYQVRVRSVAGSGTTSGWSNIVAATLTGKQGEPGRPINLTATDDVVFGIRTKWGFSEGSGDTAYTELQQSPDGTADNASLLSLIPYPQHEYYHSPMPGGNIVWYRVRTVDRIGNVSQWTDFVRGMASTNVDDIIGEISVDIENSPGYEWLVDNATDNAAQNAANAEAAIENALANDKDAIYMKKENGKRKAEYTKSLKLIADETQARVTAVEQLKASFDDQISASNSELREVIATETEAISREIDQLKAQIGDDIQASLTEIREAVANETEARTKADLTLSAKIGENEAALSQKLDSWSNASSTGAMYGVKLGLKYNGQEYSAGMAMSLIGSGAAVKAQILFEASRFAIMTGMNGQTQYPFVVEGNQVILNSAIIKNGFITNAMIGNVIQSNNFSSGSAGWMVNKNGTAEFNAVTVRGKLYASNGEFAFNGTGNTVQINNNGITVNLPGGGKVVVGRW
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 127239,86260 Da
isoelectric point:4,85572
aromaticity:0,09043
hydropathy:-0,37670

Domains

Domains [InterPro]
DC_0014
STR
1–1150
DC_0014
IPR053171
Unmapped
3–861
IPR053171 IPR015406
IPR055385
ATT
92–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
627–715
IPR036116
IPR003961
STR
628–722
IPR003961
XPO96504.1
1 1150
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-217 | STR 218-339 | ATT 340-488 | STR 489-1150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPO96504.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,8803
Central domain 506 1082 578 0,0611
C-terminal 1083 1150 67 0,8062
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-505
Central
506-1082
C-terminal
1083-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EF3-1
[NCBI] 		3385241 Viruses >
Host Escherichia fergusonii
[NCBI] 		564 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96504.1 [NCBI]
Genbank nucleotide accession
PQ571291.1 [NCBI]
CDS location
range 9189 -> 12641
strand +
CDS
ATGATTCAAAAAGTGATAAGTGGATCTAAGGGTGGGTCACAGAAGCCTCATAACCCAGTTGAGATGGAAGACAATCTAATCTCAATCAACAAAATCAAAATCCTGTTAGCTGTATCTGATGGTGAAATTGACGAAACATTCAGCCTAAAGCAGTTGATGTTTAACTCAGTTCCGGTGCAAAACGAGGATGGATCGTTCAACTTCGAAGGGGTAAAGGCTGAGTTCAGGCCGGGAACTCAGACGCAGGAATACATCAAGGGCATGGAAGATAGCTCCAGCGAGGTAACTGTAAATCGTGAGGTTACTACCGATAACCCATACACGATCTCAGTAACCAACAAAACGCTGTCGGCAATCCGTATCAAAATGTTCATGCCTAGCGGCGTACGAATTGAAAGTAACGGCGATAAAAACGGCGTTCGCGTTGAGTACGAGGTGCAGCAAGCGGTTGATGGCGGTTCGTTTGAGACTGTTCTTACTGATGTAATCGAAGGCAAAACAATGTCGGGTTATGATCGAAGCCGCCGCGTAAACCTGCCTAACTTCAACAATCAGGTAATATTCAGAGTTGTTCGAAAGACGCCTGATTCCAATGACTCGAATGTCGTTGATGCAATCCAGGTAAGAAGCTATGCCGAGGTCATTGATGCCAAATTCCGATATCCCCTGACTGGTCTTCTTTTCGTAGAGTTTGATTCGAAAATGTTCCCAAATCAACTACCTACGATCTCAATTCGTAAGCGCTGGAAGATTATTAACGTTCCATCGAATTACGACCCTGAATCGAGAACCTATAACGGCAATTGGGATGGAACTTTCAAGAAGGCGTGGACTAATAATCCGGCGTGGGTTCTATACGACCTGATGATTAATCAGCGTTATGGACTGGATCAGAAAGAGCTTGGAATCTCCGTAGATAAATGGGCGCTATATGAGGCCGCGCAATATTGCGATCAGATGGTTCCAGATGGAAAGGGTGGAACTGAGCCTCGCTACCTTTGTGACGTGATAATTCAGTCACAAACTGATGCATACAAAGTGATTCGAGATATTTGCTCAATATTCCGAGGCATGAGTTTTTGGAATGGTGAAAGCATTTCTGTAATAATCGACAGGCCGCGTGAGCCTGCGTACATCTTCACCAATGACAACGTTGTTAATGGTGACTTCTCATACACGTTTGCAAGCGAGAAAAGCATGTACACGACGTGTAACGTGATGTTTGATGATGAACAAAACATGTATCAGCAGGACGTTGAGCCAGTATTCGATCGAGAGGCCACTCTACGGTTCGGTAACAATGTAACCAGCATTACAGCGATTGGATGCACCAGGCGCAGCGAGGCTAACCGACGCGGGAGATGGATTCTGAAAACTAACCTCCGTAGCACTACGGTAAACTTCGCTACCGGGCTTGAGGGCATGATCCCGACCATCGGTGATGTGGTGGCGATAGCTGATAACTTCTGGTCAAGTAACTTGACTATGAACCTATCAGGAAGATTACTCGAAGTATCTGGAAGCCAGATTTTCTTGCCGTTCCGAGTAGATGCGCGTGCAGGTGACTTTATTATCGTAAATAAGCCCGATGGCAAGCCCGTTAAGCGTACAATCTCAAGTGTTAGTGCAGACGGCAAGACCATAGAGATTAACATAGGCTTTGGATTTCCTGTTAAGCCAAACACGGTATTCGCAATCGACCGCACCGACATAGCGTTGCAGCAGTACGTCGTGACAAAAATCGACAAGGGTGATGACGATGAGGAATTTACCTACAAGATTACTGCGGTGGAGTATGATCCTAACAAGTACGATGAGATTGATTACGGAGTGAACATCGACGACCGACCAACGAGTATTGTTGAGCCAGATCAGATACCTAAACCGGAAAATGTGCAAGTGTCCTCAGAGTCGCGAATAGTCCAGGGGATGAGCGTAGAGACAATGATTGTTAGCTGGGATAAAGTGCCGTACGCAGTTTTCTATGACGTACAGTGGCGAAAAGATAATGGCAACTGGCAAAACGTACCGCAGACGGCAAACAAGGAGGTTTATGTTGAAGGGATTTACGCTGGTAACTATCAGGTTCGCGTGCGTTCAGTAGCTGGTTCCGGTACGACTTCTGGATGGTCAAATATAGTCGCAGCGACGCTGACAGGTAAGCAGGGTGAGCCGGGTCGACCGATTAACCTTACGGCTACGGATGACGTTGTTTTTGGTATCCGTACAAAATGGGGATTCTCTGAAGGTTCAGGCGATACGGCATACACAGAGTTGCAACAGTCTCCTGATGGAACGGCTGATAACGCAAGTTTGCTTTCTCTGATTCCGTACCCGCAGCATGAGTATTATCACTCACCGATGCCTGGAGGGAATATTGTGTGGTATCGGGTAAGGACGGTTGATAGGATCGGTAACGTGTCTCAGTGGACTGATTTTGTCAGAGGTATGGCATCAACAAACGTTGACGATATCATTGGAGAAATTTCTGTCGATATCGAAAACTCGCCTGGTTACGAGTGGCTTGTTGATAATGCAACCGACAACGCGGCGCAGAACGCAGCGAACGCAGAGGCAGCAATTGAGAACGCGCTCGCTAATGACAAAGACGCAATCTACATGAAGAAGGAGAACGGAAAGCGAAAAGCTGAGTACACCAAATCTCTTAAGCTGATTGCTGATGAGACGCAAGCTAGAGTGACAGCAGTAGAGCAATTGAAGGCTAGTTTTGACGATCAGATTAGTGCTAGCAACAGCGAGTTGCGTGAGGTTATAGCAACTGAGACTGAGGCGATATCTCGTGAGATTGATCAGCTTAAGGCTCAGATTGGTGACGATATTCAGGCAAGTTTGACTGAAATCCGCGAGGCTGTCGCAAATGAAACCGAGGCAAGAACGAAAGCTGACTTGACGTTGAGCGCAAAGATCGGAGAGAACGAGGCGGCACTTTCTCAAAAATTGGATTCTTGGAGTAACGCTAGCTCAACTGGTGCGATGTACGGAGTTAAGCTGGGGCTGAAATACAACGGTCAGGAATACAGTGCTGGTATGGCTATGTCTCTGATTGGTTCAGGAGCGGCGGTTAAGGCGCAAATTCTGTTCGAGGCGTCACGATTCGCCATTATGACGGGAATGAACGGTCAGACTCAGTATCCTTTCGTTGTTGAAGGTAATCAGGTGATTCTTAATAGCGCCATCATTAAGAACGGATTCATCACGAATGCTATGATTGGAAACGTTATTCAATCGAATAACTTCTCTTCAGGTAGTGCGGGATGGATGGTTAACAAGAATGGAACGGCTGAGTTTAATGCGGTTACTGTTAGAGGTAAACTTTACGCAAGTAACGGTGAGTTTGCATTCAACGGAACGGGTAATACCGTTCAGATTAACAATAATGGCATTACGGTAAACTTACCAGGCGGCGGGAAAGTTGTAGTGGGGAGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
645c5d1666110176a6828fe6cc8df9fc3b33e85c6ff9877808e0b906d794fe55
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7656
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50