Protein

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UniProt accession
A0A1L5C2B1 [UniProt]
Protein name
Tail spike
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MDKSIQRIVRRQFPELTGQLHLPRWGRVVALPELPTDDGERGSDAFYPRYAVNVQLIDENGTDTKSKPLQAVPLPLPGAGDKAGRLEPPAINSIVEIGFAYGRADKPFIRTVLPFGWDLPAIKEGEIRTQVREGVYQFIDDQGNFENKTDESLKDIIGKLADLQCETRKVIATKEQDHRSPKTWLGSEGENVLKLLSELMATVSALANTCASHTHKGVAAGTAKTQAPEQAGEFSGQASQADEQKGRLDPITK
Physico‐chemical
properties
protein length:253 AA
molecular weight: 27740,96210 Da
isoelectric point:5,69324
aromaticity:0,05929
hydropathy:-0,53874

Domains

Domains [InterPro]
SSF69255
ATT
21–113
SSF69255
A0A1L5C2B1
1 253
Architecture
ATT
ATT 21-113 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1L5C2B1
1 253
Domain Start End Length (AA) Confidence
N-terminal 1 187 187 0,4398
Central domain 188 242 56 0,0058
C-terminal 243 253 10 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-187
Central
188-242
C-terminal
243-253

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage C5a
[NCBI] 		1916107 Uroviricota > Caudoviricetes > Peduoviridae > Catalunyavirus C5a >
Host Pseudoalteromonas sp. RHS-str. 402
[NCBI] 		1082812 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Pseudoalteromonadaceae > Pseudoalteromonas >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APM00256.1 [NCBI]
Genbank nucleotide accession
KY045851 [NCBI]
CDS location
range 34278 -> 35039
strand +
CDS
ATGGATAAATCAATACAAAGAATAGTACGCCGGCAGTTTCCAGAACTAACGGGCCAATTACATTTACCGCGCTGGGGTAGAGTAGTTGCATTGCCTGAACTACCAACTGATGATGGCGAGCGCGGTAGCGATGCATTCTACCCACGCTATGCTGTTAACGTTCAGCTTATTGACGAAAACGGCACAGACACCAAATCAAAACCACTTCAAGCTGTGCCGTTACCATTACCAGGTGCAGGTGATAAAGCAGGCCGATTAGAACCGCCGGCTATTAATTCTATTGTAGAAATTGGCTTTGCTTATGGGCGAGCAGATAAACCATTCATCAGAACAGTATTGCCTTTTGGTTGGGACTTACCTGCAATCAAGGAGGGTGAAATCCGCACACAAGTACGCGAGGGTGTTTATCAGTTCATTGATGATCAAGGCAACTTTGAAAACAAAACAGACGAATCATTAAAAGACATCATCGGCAAATTAGCCGACCTACAATGTGAAACCCGCAAAGTAATAGCAACTAAAGAGCAAGACCACCGAAGCCCAAAAACATGGTTAGGCAGTGAAGGCGAGAACGTACTTAAGTTATTATCAGAGTTAATGGCAACAGTAAGCGCCTTGGCTAACACATGTGCAAGCCACACACACAAGGGCGTAGCAGCAGGAACAGCAAAAACCCAAGCACCAGAACAAGCCGGAGAGTTTAGCGGCCAAGCATCACAAGCCGACGAACAAAAAGGCAGGCTAGACCCAATAACAAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cb2b3786aa93e7d42870c9e23c220d560084bce1b5ba59a0cd31682411a630fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50