Protein

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Genbank accession
AUR92938.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTVETIVSAPLGVAGEYPSHDNKLGLGGVHIFTNIKARDLMWSELKDGNTVSLVGVGENGFPSWYKWESNKWHFSGYFGGMVLADVDGALTHVDSTAVFSSDFEIQGAGDTGQGVLLKLSAAIKEEIAKKAGAGAITVKDATKTAAGVSEITIAEGLELVVDGSDATKATVRIAPQVFGQGTPSAYLAGMTKDKIITAADSDAIVFYDMPMTEAGRGIEVDVDKYGIQDPTFDDPNVTGGTPTEVLATIGFNGSAPEDGRITFSVKLKQAGQVEAYLKNPNGKVVVYARDVKQGQELKPMFLAGLVQAKGIEYIRFHVSHTFKNSDLVIDHTQAFMCFQQLTGGWRSSVARNTFEQKSGITFTPMIEHFGESILSADHEFKNDIALRGLNSYSGWDDLDIIGLRNLTKVQAGVDGGKLIVKNDGVSVTDFMVDMAADHHKTRMLRGHNVRFDFELVDKNNGWNLGLFAWTGEADKFGDLYSTRTNGAISLNSNFAQITNTFISEDAISGVHKVSVSGVVPDNANNVIAFLYPIQAQSPITMQIQSASMSATPFTAYMETSPILASELHLHFSEVYTRFVQNTQGYASLRYTYNAAEQPAPTGIQFKGKAPITIDTATNQVGGSQARGGEGAYKFNFAGTVSISVSASASNETGNDSTMALFFRKVNPDNTLGDEIPDSRVTWTIKAGDKNVEHGLPAFLLDVVTGDRIAPRVLESAVDGGYLKCDNDRQPLIETIFDIKKLTP
Physico‐chemical
properties
protein length:743 AA
molecular weight: 80071,03480 Da
isoelectric point:5,13304
aromaticity:0,08883
hydropathy:-0,15585

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR92938.1
1 743
Domain Start End Length (AA) Confidence
N-terminal 1 186 186 0,9086
Central domain 187 385 200 0,4307
C-terminal 386 743 357 0,9783
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-186
Central
187-385
C-terminal
386-743

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.179.O._10N.286.45.F12
[NCBI] 		1881432 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92938.1 [NCBI]
Genbank nucleotide accession
MG592546.1 [NCBI]
CDS location
range 19108 -> 21339
strand +
CDS
ATGACAGTAGAAACAATTGTAAGCGCACCGCTTGGTGTGGCGGGTGAGTATCCAAGTCATGACAATAAGCTGGGATTGGGTGGAGTTCATATTTTCACGAATATTAAAGCGCGCGATCTAATGTGGTCAGAGCTTAAGGATGGAAATACAGTTTCACTGGTTGGGGTTGGTGAGAATGGGTTTCCGTCTTGGTACAAGTGGGAGTCTAACAAGTGGCATTTTTCCGGTTACTTTGGCGGCATGGTATTAGCAGATGTTGACGGAGCGTTAACGCATGTTGATAGTACGGCGGTGTTTAGTTCTGACTTTGAGATTCAAGGCGCAGGCGATACAGGTCAAGGCGTACTGCTAAAGCTTAGTGCTGCAATAAAAGAGGAGATCGCAAAAAAGGCGGGAGCTGGTGCGATAACTGTCAAGGATGCAACCAAAACGGCGGCGGGTGTTTCTGAAATAACCATAGCGGAGGGATTGGAGCTTGTGGTGGATGGAAGCGACGCCACAAAAGCAACCGTAAGAATTGCGCCGCAAGTATTTGGACAAGGCACGCCAAGCGCATATCTAGCAGGGATGACGAAAGACAAGATAATAACAGCGGCGGATTCTGACGCGATTGTTTTCTATGACATGCCAATGACGGAAGCGGGGCGAGGAATAGAAGTTGATGTGGACAAGTACGGAATCCAAGACCCGACATTTGACGATCCTAATGTAACAGGCGGTACGCCTACGGAAGTTCTGGCAACTATTGGATTTAATGGAAGCGCACCGGAAGATGGTCGCATAACGTTTTCTGTCAAGCTCAAACAGGCAGGGCAAGTGGAGGCGTATCTTAAAAATCCAAATGGAAAGGTTGTTGTTTATGCTCGGGATGTAAAGCAAGGGCAAGAGCTAAAGCCAATGTTCTTGGCGGGATTGGTGCAAGCAAAAGGAATTGAATACATCCGCTTCCATGTGTCGCACACGTTCAAAAACAGCGATCTTGTTATCGACCACACACAAGCGTTTATGTGCTTCCAGCAATTAACAGGCGGCTGGCGCTCATCGGTAGCAAGAAATACATTCGAACAAAAGTCAGGCATTACGTTTACTCCAATGATTGAGCATTTTGGGGAAAGCATCCTAAGTGCAGATCATGAGTTTAAAAATGACATTGCACTGAGGGGGCTTAATTCTTATTCGGGCTGGGATGATTTGGATATTATCGGACTGCGCAATCTAACCAAGGTGCAAGCTGGGGTTGATGGTGGAAAGCTAATAGTCAAAAATGATGGCGTGAGCGTTACGGATTTTATGGTTGATATGGCAGCAGATCACCATAAGACAAGAATGCTACGCGGTCACAATGTGCGCTTTGACTTCGAGCTGGTGGACAAGAACAACGGCTGGAATCTTGGCTTGTTTGCATGGACTGGCGAGGCTGATAAATTTGGGGATTTATACAGCACCAGAACCAACGGAGCGATAAGCCTAAACTCTAACTTTGCTCAGATAACAAACACTTTCATTAGTGAGGACGCTATATCCGGCGTTCATAAAGTTAGTGTTTCCGGTGTTGTTCCAGATAACGCAAATAACGTGATCGCATTCTTGTATCCAATACAAGCCCAATCACCAATCACGATGCAAATACAATCAGCTTCCATGAGTGCAACACCGTTCACGGCATACATGGAAACATCACCAATATTGGCAAGTGAGCTGCATTTGCATTTTTCGGAAGTGTACACGCGCTTTGTGCAGAACACGCAAGGTTATGCAAGCTTACGCTACACATACAACGCAGCAGAGCAACCAGCACCAACAGGCATTCAATTCAAAGGTAAAGCACCAATCACCATTGATACAGCCACAAACCAAGTAGGGGGAAGTCAAGCGCGCGGCGGCGAGGGCGCATACAAGTTTAACTTTGCTGGTACGGTTAGCATTTCAGTAAGTGCGAGCGCATCAAATGAAACTGGCAACGATTCAACCATGGCGCTATTTTTCCGCAAGGTAAATCCAGACAACACTCTAGGCGATGAGATTCCAGACAGTCGAGTAACATGGACAATCAAGGCGGGAGATAAAAACGTTGAACACGGGCTACCAGCGTTCTTGCTTGATGTTGTAACGGGTGATCGCATTGCGCCGCGTGTGCTAGAGAGTGCGGTAGACGGTGGGTATCTGAAATGTGACAACGACCGTCAGCCGTTGATAGAAACAATATTTGATATCAAAAAGCTAACACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0924a88eef037e95c8a351020ee9ffab967b9eb881ae419d696cd060b178ffe3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank