Protein

View in Explore

Genbank accession

QIG76835.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,96

Protein sequence

MNELVRTKGLNIVASGGGGGKGGKTKDDSNTLRSNATAQLLYLIGEGRMQGIVGGRKNVILDETRIDSASGSTNIKGVTVYERFGLPTQDPIPNFNGVANEISVGAKVSASTPIVRSLTDSDYTSCAVTIRLPALVKSTDKGFKKSSVSFRIEVRANGGTYQNLLGDITITGKCIAPYDVQYIMKLPVATSGNSYPWDIRVTRLTEDSTSDKLQNETYFASMTGIIDVTLQYPDSALLGLLFDAKEFDGGVPAVSAICDGVWIDVPSNYNPVTRVYSGEWDGTFVKAFSDNPAWVYWDMATHNRYGLGKLLDKQAVDKWTLYAIAQVCDQMVSDGYGGQEPRFTVNAYIVKASEAYEMMQMIASAFRGMSFWGSGALTATQDTLADPKVLVTKSNTLADGFSYSSSALTARHTVVHVKYRDKKDDYQPAMEVVRDADGMLRYGERIKEIDGFGITSRAQARRLGLWVLYTELYETSVVSYQAGLDHTMRRPGDIISVLDPEIANADVGGRLATGTSVGTLVLDRQVTIEAGKTYTAHVTLADGTLEERGVTNAPGDTTTLTLASDLPSAPATQAQWILASNTLVPKPYRIVSILERQKATYEVSALEIYHNKYALIDSDLVLDDPPYQQPLIPDPPTNLTAQEIFFYANGVPTSQLLFSWTPAATQVAPLFRIEIDVPGADNEIVVDRFSGISFTVPNSEPGFYTIRLYAQNISGTAKSEVRTLTVNAEAVNAADLIVVENIRIVGESGHEFYSRDVEIAWDNVIPSGNTTNLLYKRNRVVVSDMTDPLTPVVLRVDYTTSTSYIYSYAMNQEDAGTAVRDLQFSVLAEDVMGRQGAEADFLASNPPPAAPSVTVTGSVGGIYVDTVFPQLKDVQGQVVHVSETEVFTPDGTTLAYSGASSFTFVLKEPGDYWVKVALYDDFGGELNFTSSIGVSVASTDIDTVPPAVPTGLAVNSVLRPDGLVDVTYTWDANTELDLFGYIIQIKEGAGEYLQFLAPGNTYTTTVGPNVELTAAVLAYDTTGNRSNYSDPPLVYTTVKDETPPAKPTGLLAAAGLAAIWLNWNQNTETDLHHYEVWENDEDVFGTATLIMRTSATAASRSGLPLDTERWYWIVAVDTSGNASVPSDSISGVTGSVPDGAVYSVIGITFTPNDGATNRLGWTSGNIAYGPPGEDPTVSAISAGTADWTTGTLYVYYVEGATTLATATTIGSVYLNSGHLLGVYKGSLNFQLVSGQALIDGNTIIAGTIGADQLIATEAVITGTAQIADAIITNAKISDLSAAKLTAGTALAGSITVAGTALSTIQGQAADPAPQINAGSTLIDPGKILISGATKLSDWRNGTDNTKIEGGSIAANTITANKLTIGQRGVRLENIQFSYDKDTQVVSWTAGTLRYMSTNATTGVVEQRGLIVNSGTATWTSGRLYIYWQKPSTDPAQSSTISFASSNVIATANAADTIVFASYDGGTKFNSEYGQTIIDGSTIKTGTITADQIQVGSLTGDLIAAETITGDNIAAGSITAKHLIIGDFSNIVPNGDYTDTDASAYWTMAGDPGSISIITNPAVARTGPNYLRLVKNDVANNTWATTDYVQVTAGDALSWSTAIKGNVAATGGAYLQIYWYDAAKVAITPDHSDLMADKPLSTSWVAYNGSITVPTGAAFAVFLIMSYTTNTTAVWLEWDRIIIRRSQSVVIADGSITAIKLNVSTLSSITANIGTVTAGVLQSTDGKVQFDLTNKRILMADNT

Physico‐chemical properties

protein length:	1742 AA
molecular weight:	185867,75580 Da
isoelectric point:	4,60273
aromaticity:	0,08496
hydropathy:	-0,04363

Domains

Domains [InterPro]

IPR053171
Unmapped
10–717

IPR053171 DC_1241 IPR013783 IPR013783 DC_1605

DC_0129
STR
26–841

DC_0129 DC_1204

IPR055385
ATT
98–227

IPR055385 IPR032876 IPR003961 DC_1204

QIG76835.1

1 1742

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

RBD

STR

STR 26-97 | ATT 98-227 | STR 228-352 | ATT 353-500 | STR 501-838 | ATT 839-944 | STR 945-1136 | RBD 1137-1429 | STR 1430-1682 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	10	717	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	26	841	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	98	227	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	353	500	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	633	716	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
DC_1241	ATT	DC_1241	839	941	Novel HMM	DC_1241	N-terminal	Low	Positional only	68 proteins / 68 hits
DC_1204	RBD	DC_1204	930	1042	Novel HMM	DC_1204	C-terminal	Low	Positional only	12 proteins / 12 hits
IPR013783	STR	IPR013783	945	1041	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_1204	RBD	DC_1204	1032	1429	Novel HMM	DC_1204	C-terminal	Low	Positional only	12 proteins / 12 hits
IPR013783	STR	IPR013783	1043	1136	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_1605	STR	DC_1605	1430	1682	Novel HMM	DC_1605	Central	Low	Positional only	12 proteins / 12 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Rhizobium phage RHph_Y1_11 [NCBI]	2509770	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

QIG76835.1 [NCBI]

Genbank nucleotide accession

MN988558.1 [NCBI]

CDS location

range 7263 -> 12491
strand +

CDS

ATGAACGAACTCGTCAGGACCAAAGGCCTCAACATCGTTGCCTCCGGTGGCGGGGGCGGCAAAGGCGGCAAGACCAAGGACGACAGCAACACGCTGCGATCCAACGCAACCGCCCAGCTCCTCTACCTGATCGGCGAAGGCCGGATGCAGGGCATCGTCGGCGGGCGCAAGAACGTCATCCTGGACGAGACCCGCATCGACAGCGCCAGCGGCTCGACCAACATCAAAGGCGTGACGGTCTATGAACGCTTCGGCTTGCCGACGCAGGACCCGATCCCGAACTTCAACGGCGTGGCCAACGAAATCTCGGTCGGGGCCAAGGTCAGTGCCAGCACGCCTATCGTCCGCTCCCTGACCGACAGCGATTACACCTCGTGCGCCGTCACCATTCGTCTGCCGGCCCTGGTCAAATCCACCGATAAGGGCTTCAAGAAGAGTTCGGTCAGCTTCCGCATCGAAGTGCGCGCCAACGGCGGCACCTATCAGAACCTGCTGGGTGACATCACCATCACCGGTAAATGCATCGCGCCCTACGATGTCCAATACATCATGAAGCTGCCGGTCGCGACCAGCGGCAACAGCTACCCGTGGGACATCAGGGTCACCCGTCTGACGGAAGACAGCACCAGCGACAAGCTGCAGAACGAGACCTATTTCGCTTCGATGACCGGCATCATCGACGTGACGCTGCAATACCCTGACAGCGCCCTGCTCGGCCTGCTGTTCGACGCCAAGGAATTCGACGGCGGCGTGCCGGCGGTCTCGGCGATCTGCGACGGCGTTTGGATCGACGTGCCCTCGAACTACAATCCGGTGACCCGCGTCTATTCCGGCGAATGGGACGGCACCTTCGTCAAGGCCTTCTCTGACAACCCCGCCTGGGTCTACTGGGACATGGCGACCCACAATCGCTACGGCCTCGGCAAGCTGCTCGACAAGCAGGCGGTCGACAAGTGGACGCTCTACGCGATCGCCCAGGTCTGCGACCAGATGGTTTCGGATGGCTACGGCGGGCAGGAGCCGCGCTTCACCGTCAACGCCTACATCGTCAAGGCCAGCGAAGCCTACGAGATGATGCAGATGATTGCCTCGGCCTTCCGAGGCATGTCCTTCTGGGGCTCCGGGGCGCTGACCGCGACACAGGATACCCTGGCCGACCCGAAGGTGCTTGTCACCAAGTCGAACACACTGGCAGACGGCTTCTCCTATTCGTCCTCGGCCCTGACCGCCCGTCACACCGTCGTCCACGTCAAATACCGCGACAAGAAGGACGACTACCAGCCGGCCATGGAAGTTGTCCGGGACGCCGATGGCATGCTCCGCTATGGCGAGCGTATCAAGGAGATCGACGGCTTCGGCATCACCAGCCGCGCCCAGGCGCGCAGGCTCGGGCTCTGGGTGCTCTACACCGAACTCTACGAGACCTCGGTGGTTTCCTACCAGGCCGGTCTCGACCACACGATGCGCCGCCCCGGCGACATCATCTCGGTCCTCGACCCAGAGATCGCCAACGCCGATGTCGGTGGCCGCCTGGCGACTGGGACCTCGGTCGGCACCCTCGTACTCGACCGACAGGTGACGATCGAAGCTGGCAAGACCTATACGGCTCACGTCACCCTGGCGGACGGGACGCTGGAGGAGCGCGGCGTAACCAACGCCCCCGGCGACACCACCACGCTCACCCTGGCCTCCGACCTGCCCAGCGCGCCGGCCACTCAGGCCCAGTGGATCTTGGCCTCCAACACCCTCGTGCCGAAACCCTACCGCATCGTCTCGATCCTGGAGCGGCAGAAGGCCACCTATGAGGTCTCGGCGCTGGAGATCTACCACAACAAGTACGCCCTGATCGACAGCGACCTGGTGCTGGACGACCCGCCGTATCAGCAGCCGCTGATCCCCGACCCGCCGACCAATCTGACGGCACAGGAAATCTTCTTCTATGCGAACGGCGTGCCGACCTCGCAGCTCCTGTTCTCGTGGACCCCGGCGGCCACCCAGGTCGCGCCGTTGTTCCGCATCGAGATCGACGTCCCCGGTGCGGACAACGAGATTGTCGTGGACCGGTTCTCTGGCATCTCTTTCACGGTGCCGAACAGCGAGCCCGGTTTCTACACCATCCGGCTTTACGCCCAGAACATCAGCGGCACCGCCAAGTCGGAAGTCAGGACCCTCACGGTCAACGCCGAAGCGGTCAACGCGGCCGACCTGATCGTGGTCGAAAACATCCGCATCGTCGGCGAGAGCGGCCACGAGTTCTACAGCCGCGATGTCGAGATTGCCTGGGACAACGTCATCCCCTCGGGTAACACGACCAATCTGCTCTACAAACGCAATCGCGTCGTCGTCAGCGACATGACTGACCCGCTGACCCCGGTGGTTCTCAGGGTCGATTACACCACCTCGACCAGCTACATCTACAGCTACGCCATGAACCAGGAAGACGCCGGCACCGCCGTCCGAGACCTGCAGTTCTCGGTGCTGGCCGAAGACGTCATGGGCCGCCAAGGGGCGGAAGCCGACTTCCTCGCCTCGAACCCTCCCCCGGCCGCGCCCTCGGTCACCGTGACGGGATCTGTCGGTGGCATCTATGTCGATACCGTCTTCCCGCAGTTGAAGGATGTGCAGGGGCAGGTCGTCCACGTCAGCGAGACAGAGGTCTTCACCCCTGACGGCACGACGCTGGCCTACAGCGGGGCGTCCTCGTTCACCTTCGTCCTCAAGGAGCCTGGCGACTACTGGGTGAAGGTCGCGCTCTACGATGACTTCGGCGGCGAGCTGAACTTCACCTCTTCGATCGGGGTGTCGGTCGCCTCGACGGACATTGACACCGTGCCCCCGGCTGTTCCGACCGGCCTGGCAGTGAACTCGGTGCTGCGGCCAGACGGCCTCGTGGATGTCACCTATACCTGGGACGCCAACACCGAACTCGACCTGTTCGGCTACATCATCCAGATCAAGGAAGGTGCCGGCGAGTATTTGCAATTTCTTGCACCGGGAAACACCTACACCACCACGGTCGGCCCCAACGTCGAACTGACCGCTGCCGTGCTGGCCTATGACACCACCGGCAACCGCTCCAACTATTCCGACCCGCCGCTGGTCTACACCACGGTGAAAGACGAGACACCGCCGGCCAAGCCGACAGGTCTGCTCGCCGCTGCCGGCCTCGCCGCGATCTGGCTGAACTGGAACCAGAACACCGAAACCGACCTGCACCATTACGAGGTGTGGGAGAACGACGAAGACGTGTTCGGCACGGCCACGCTGATCATGCGGACCTCGGCCACCGCCGCCTCGCGCTCTGGCCTTCCGCTGGACACGGAGCGCTGGTACTGGATCGTCGCGGTCGACACATCCGGCAACGCCTCGGTCCCGTCTGATAGCATCAGCGGCGTCACGGGATCGGTGCCGGATGGTGCAGTCTATTCTGTCATCGGCATCACGTTCACCCCGAACGACGGCGCGACGAACCGGCTCGGCTGGACCTCTGGCAACATCGCCTATGGCCCTCCCGGCGAGGACCCCACTGTCAGCGCCATCAGCGCCGGCACAGCCGATTGGACCACGGGCACGCTCTACGTCTATTATGTCGAAGGGGCGACCACCCTGGCCACCGCGACCACGATCGGTTCGGTCTACCTGAACAGCGGCCACTTGCTCGGCGTTTACAAGGGCAGCTTGAACTTCCAGCTCGTCAGTGGCCAAGCCTTGATCGATGGCAACACGATCATTGCCGGCACCATCGGTGCGGACCAACTCATCGCCACCGAGGCGGTCATCACCGGCACGGCCCAGATCGCCGACGCCATCATAACCAACGCCAAGATCTCCGACCTGTCGGCGGCAAAGCTGACGGCGGGCACGGCGCTCGCTGGCTCGATCACGGTTGCCGGGACGGCGCTCTCGACCATCCAGGGGCAGGCCGCCGATCCGGCCCCTCAGATCAATGCCGGCAGCACCCTGATCGACCCAGGCAAGATCCTGATCTCCGGGGCGACCAAGCTCTCCGACTGGCGCAATGGGACGGACAACACCAAGATCGAAGGCGGCTCGATCGCTGCCAACACGATCACGGCCAACAAGCTGACCATCGGCCAGCGCGGGGTGCGGCTGGAGAACATCCAGTTCAGCTACGACAAGGACACCCAAGTCGTTTCCTGGACGGCCGGCACGCTCCGGTACATGAGCACCAATGCGACAACGGGGGTGGTTGAGCAACGCGGCCTGATCGTCAACTCGGGCACGGCGACATGGACCTCGGGGCGGCTCTACATCTATTGGCAGAAGCCCTCCACCGATCCTGCGCAGTCCTCGACCATCTCGTTTGCCTCCAGCAACGTCATTGCCACGGCCAACGCCGCCGACACCATCGTGTTCGCCTCCTATGACGGCGGCACGAAGTTCAACTCGGAATACGGCCAGACGATCATCGACGGCTCCACGATCAAGACGGGGACGATCACCGCCGACCAGATCCAGGTCGGTTCGTTGACCGGCGACCTGATCGCGGCCGAGACGATCACAGGCGACAACATCGCGGCAGGCTCGATCACGGCGAAGCACCTGATTATCGGCGACTTCTCCAACATCGTCCCGAACGGCGATTACACCGACACGGACGCATCCGCGTACTGGACGATGGCTGGCGATCCCGGCTCGATCTCGATCATCACCAACCCCGCCGTGGCCCGCACCGGACCGAACTACTTGCGCCTGGTCAAGAACGATGTCGCCAACAACACCTGGGCCACGACAGACTATGTCCAGGTGACGGCCGGTGATGCTCTCTCCTGGTCGACGGCGATCAAGGGCAACGTGGCGGCCACGGGCGGGGCCTACCTACAGATCTACTGGTACGACGCCGCCAAGGTGGCGATCACCCCCGACCACTCCGACCTAATGGCGGACAAGCCACTCTCGACCTCATGGGTCGCTTACAACGGCAGCATAACCGTGCCGACCGGCGCAGCCTTCGCGGTCTTCCTGATCATGAGCTACACCACCAACACGACGGCGGTCTGGCTGGAGTGGGATCGGATCATCATCCGCAGATCTCAATCAGTTGTGATTGCTGATGGGTCGATCACGGCTATCAAGTTGAATGTTTCGACACTTTCGTCTATCACGGCGAACATCGGTACAGTAACTGCTGGGGTACTGCAGTCCACGGACGGCAAGGTGCAGTTCGATCTGACGAACAAGCGCATATTGATGGCGGACAACACATAA

Genome Context

Tertiary structure

PDB ID

61efb1a15a6c50a419dd56d68cdd19e679b9f7ccbd19ffbfdd91973d9f844dbc

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7763

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria	Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V.	1998-01	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature