Protein

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Genbank accession
XHY53339.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAIKAGWVGSSAVSETGQRWMSAAMQAVRLGRPAYMSAMVGRSKEIHYSIGASNSYNKDTLINWMKAQGSTPVVITITGNIVSQSTGVPCLDFPSSLTNEYVTLIINSGVHVWGRGGNGGNNSAGGAGGNAINNGIGTRLRITNNGAICGGGGGGGGGYYSPFSQMKLTFGGGGGRPFGAAGGSANMEQGATAGTISAPGKGSVNGVYNGGNGGDAGGAGGKCNIRGQGSEYNGGAAGKAVTGNAPRWDKVGTIYGARV
Physico‐chemical
properties
protein length:259 AA
molecular weight: 25650,24890 Da
isoelectric point:9,83493
aromaticity:0,06950
hydropathy:-0,20579

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_1679
STR
4–165
DC_1679
XHY53339.1
1 259
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-165 | RBD 166-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFHK24
[NCBI] 		3350103 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri 2a
[NCBI] 		42897 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Shigella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHY53339.1 [NCBI]
Genbank nucleotide accession
PQ351812.1 [NCBI]
CDS location
range 50572 -> 51351
strand +
CDS
ATGGCAATTAAAGCAGGTTGGGTCGGATCATCGGCTGTGTCCGAGACTGGTCAACGGTGGATGAGCGCCGCAATGCAAGCTGTACGCTTAGGCCGTCCGGCGTATATGTCAGCGATGGTCGGACGCTCTAAAGAGATTCATTATAGCATTGGCGCTAGTAACTCTTACAATAAAGACACTCTTATTAACTGGATGAAAGCACAAGGATCTACTCCGGTAGTAATTACTATCACAGGTAATATTGTTTCCCAATCTACTGGCGTTCCTTGTCTTGATTTCCCTAGCTCACTAACAAATGAATATGTAACACTCATTATTAACTCTGGTGTTCATGTCTGGGGGCGTGGTGGTAATGGTGGCAATAACTCCGCTGGTGGTGCTGGTGGTAATGCAATTAACAACGGTATAGGCACACGCTTGCGCATCACAAATAACGGCGCTATTTGCGGTGGCGGTGGCGGCGGTGGCGGCGGGTATTATTCTCCTTTTTCACAAATGAAATTGACTTTTGGTGGAGGGGGCGGTCGTCCATTTGGTGCTGCTGGTGGGTCTGCTAATATGGAACAGGGTGCTACTGCTGGTACTATTTCCGCGCCAGGTAAAGGGTCTGTCAACGGTGTATATAATGGCGGTAACGGTGGTGATGCTGGTGGTGCTGGTGGTAAATGTAATATCCGTGGACAGGGGTCGGAATATAATGGCGGAGCGGCTGGTAAGGCTGTTACTGGCAATGCCCCTCGCTGGGATAAAGTAGGCACGATCTACGGTGCTCGTGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9aa2a785cc59f30194b9f33e78f60dd341649847270287ceac3436c1650a571d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8981
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50