Protein

View in Explore
Genbank accession
QIG73266.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MADFQPPWADSGERREPTTDEQDNGFGCGAASLPLFNWMFWAIQSEIKNVLIPAGLTPSNADMTQLKQAIQIMIDASTGGGDPSGYLTLLQARARLPIFPEVLSAPYHFGVISPGTGQVRVPSGVNFQHRGIYPVTTVQTDLATDPSKIYHLRWSPTGGFALKDLASGVYNPSALAETNVAFDTTYDDMLVARVITNSSNVPTITNLINKDRIHDTFEDLAAPTSLSGANGSNRTALFTFNYARTPKTSAHWYYIDYAGEYPAGSGDQDQRLVETITRYNDSIVAMYDFATQTGIKLLAVA
Physico‐chemical
properties
protein length:301 AA
molecular weight: 32786,28030 Da
isoelectric point:4,86226
aromaticity:0,10299
hydropathy:-0,20631

Domains

Domains [InterPro]
DC_0512
STR
1–239
DC_0512
QIG73266.1
1 301
Architecture
STR
STR 1-239 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N17
[NCBI] 		2509742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG73266.1 [NCBI]
Genbank nucleotide accession
MN988530.1 [NCBI]
CDS location
range 30135 -> 31040
strand +
CDS
ATGGCTGACTTTCAACCGCCTTGGGCAGATTCCGGAGAACGTCGCGAACCGACGACCGACGAGCAGGACAACGGCTTCGGATGCGGCGCAGCAAGCCTTCCCTTGTTCAACTGGATGTTTTGGGCAATCCAGTCCGAGATCAAGAACGTTCTCATCCCGGCCGGCTTGACCCCGTCCAACGCCGACATGACGCAGTTGAAGCAGGCGATCCAAATCATGATCGATGCTTCCACAGGTGGCGGTGACCCGTCTGGTTACCTCACGTTGCTGCAAGCTCGAGCTCGCTTGCCCATCTTCCCGGAAGTGCTCTCTGCACCCTATCATTTCGGCGTCATTTCGCCGGGCACAGGCCAGGTCCGTGTCCCGTCCGGCGTCAACTTCCAGCATCGCGGGATCTATCCGGTGACGACCGTTCAAACGGATCTCGCCACGGACCCGAGCAAGATCTATCACCTTCGCTGGTCGCCGACAGGGGGCTTCGCCCTCAAGGATCTTGCGAGCGGTGTTTACAACCCGTCTGCGCTCGCTGAAACAAACGTGGCATTTGACACGACCTACGATGACATGCTGGTCGCTAGGGTCATCACGAACTCGTCCAACGTTCCGACAATCACGAATCTGATCAATAAAGATCGGATTCATGACACGTTCGAAGACCTTGCTGCACCGACTTCGCTTTCGGGCGCAAACGGTTCGAACAGAACCGCACTCTTCACCTTCAACTACGCCCGTACCCCGAAGACCTCGGCCCATTGGTACTATATCGACTATGCTGGCGAGTACCCTGCCGGTAGCGGGGACCAGGATCAGCGGCTGGTTGAGACCATCACCCGCTATAACGATAGCATCGTTGCGATGTATGACTTCGCAACCCAAACGGGCATCAAGCTCCTGGCGGTGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
062295e1189a1fc2d7409fb40d13b61263423056cbfe99f455382a6fdaaf8de2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank